Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0998 ATGGCTGCCATGAACTCAAGTGTCTTGGCTTGTAGCTATGTCAGATCTTGCTCTGATCTCAATACCAAGCTCACTTCTATGCCTTCGGTTGCATCACCACCACCTGTCTCTGGGCACAAGTTACCTGTGATCAAGATAAAGGCTCAACATTCATCCAAAGAATCACAAGCAAACGAAGGAAGGAGAAGTGCCCTTGTTTACTTGGCAGCCACCCTTTTCACCGCTTCAGCTGCTGCTTCCAATTCTTCTGCCAATGCTGGGGTCATTGAAGAATACCTTGAAAAGAGCAAGGCCAACAAGGAACTGAATGACAAGAAGAGGTTAGCTACAACAGGGGCAAATTTTGCAAGAGCATACACTGTGGAGTTTGGCACTTGCAAGTTCCCCGAGAACTTCACTGGTTGCCAAGATCTAGCCAAGCAAAAGAAAGTGCCATATATTTCTGATGATTTGGAGATTGAATGTGAAGGAAAGGACAAATACAAGTGTGGGTCTAATGTTTTCTGGAAATGGACAAAGCCTTGA 525 0.4476 MAAMNSSVLACSYVRSCSDLNTKLTSMPSVASPPPVSGHKLPVIKIKAQHSSKESQANEGRRSALVYLAATLFTASAAASNSSANAGVIEEYLEKSKANKELNDKKRLATTGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPYISDDLEIECEGKDKYKCGSNVFWKWTKP* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0998 174 Gene3D - 87 171 IPR044907 -
Apr2g0998 174 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 - -
Apr2g0998 174 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 47 171 IPR008796 GO:0009522|GO:0015979
Apr2g0998 174 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0998 Apr-Chr2 16241827 16243786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0998 1 142 Calmodulin-binding Proteins AT5G64040 61.379 8.21e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0998 K02701 - csv:101204396 244.588