Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0969 ATGGCCACTCTTCCTCTCATGAATGTTGTAGTTATTTCCAAGCTAATAATAATCTTCTTCTCTCCAATTTCCTTAGCAATTGACACCATTACCCAGTCTCAGCCACTTCACGATGATGGCAGCACCTTGATTTCAAACCATGGAACCTTTGAGTTGGGGTTCTTTAGTCCCGGTAGATCCACCAACCGTTACATAGGAATTTGGTACAAAACCATCCCAGTTAAAACTGTTGTTTGGGTTGCCAACCGTGACAACGCAATAAAAAACAACAATTTTAGCATGTTAACCATAAGCAAAGAGGGAAACCTCGTACTTGTCAATAACAACCACCAAACTCTTTGGTTATCAAACATCACAACAACACAACCTTTGAAGAGTCCTTTGGTTCAACTCTTGGACACTGGAAACTTGGTACTTAAAGAGAACAAGAAAGAAGAAAGTTTCTTGTGGCAAAGCTTTGACCATCCTTGTGACACACTCTTGCCAGGGATGAAGCTTGGATGGGACCTAAAAACTGGTCTTAATAGGAAACTAACTGCTTGGAAGAGTTGGGATGACCCATCTTCAGGAAACTTATCATGGGGTGTGCTCCTTAGTAGCAACCCTGAATTGGTACTTTGGAATGGTTCAATTGAGTACCATAGAAGTGGGCCTTGGAATGGGCCTGGGTTCAGTGGACAGCCCGTATTGAGGATGGCTCGAATTGTTGACCCCAATTTTGTCAACAATTCAAATGAGGTTTATTACTCTTACACCCTTGCCAACAAGTCCATGATTTCAATAACTTACTTGAACCAAACACTTTCTCATCGTCAACGCATGAATTGGATTCCTGAGAACAACACTTGGAGGGTTTTTGAGTCTATTCCAAGAGATGATTGTGATCTTTATAACACTTGTGGCCCTAATGGAAATTGCAAGGATAATGAGACACCAATTTGCCAATGTTTAGAAGGGTTCAAGCCAAAATCGCCCCAGAATTGGGACATGTTTGATTGGACACAGGGATGTGTGCGTAGTGAACCTTGGAGGTGTGGTGTGAGAAACCAAGATGGTTTTCAAAGATTCTATTCAATTAAAGGACCAGATACTAGAAATTCTTGGACCAATGGTAATATGACACTTGAGGATTGCAAGGTCAAGTGTTTGGAAAATTGCTCATGCATGGCTTATTCTAACTTAGACATAACAGGTGGTGGTAGTGGTTGTTCCATTTGGTTTGGAGATCTTAACGATTTGAAATTGATTACAGCAAGCCAACAGGATCTCTATATTCGCAAGGCTGTTCCAGATATAGCTTCAAATGGAGATGCAAAAGATGGGGATAAGAAAAAGAAGGATTTAATAATTACGATCACACTGGTATCAGCTCTGGTTTTGCTACTTCTTGTATACTATATTTACAGAGCCAGAAGAAAGATCAGAGGAATGAAAGATGAAATAAAGAACATCATATCAATTGAAAAGGTAGATAAAGATGAAGAACACAATTTGGAGCTTCCTTTCTTTGATTTTGCTACAATATTCAATGCCACCAATGGTTTTTCAGACGATAACAAGCTTGGACAAGGTGGTTTTGGGCCAGTATATAAGGGTACATTATTAGATGGACAAGAAATTGCTGTCAAAAGGCTCTCAAAGAGTTCTAGACAAGGAGTAAAAGAATTTAAGAATGAAGTCATATTGTGTGCTCAACTTCAACACCGAAATCTTGTTAAGGTCCTTGGTTGTTGCATTGAAGGAGAGGAAAAAATGTTACTTTATGAATACATGCCCAACAAAAGCTTGGATTCATTTCTTTTCGATTCAACTCAAAGCAAACTACTAGATTGGTCGAAGCGCTTTCACATTATGTGTGCAATTGCTCGTGGACTTCTTTATCTACATCAAGATTCAAGATTAAGGATCATACATAGAGATCTAAAAGCAAGTAACATTTTATTAGACAATGATATGAATCCAAAAATTTCAGATTTTGGCTTAGCAAGAATTTGTGGAGATAATCAAATTGAAGGAAATACAAATATAATAGTCGGAACATATGGTTATATGGCACCAGAATATGCCATTGATGGGTTATTCTCCATAAAATCTGATGTGTTTAGCTTTGGCATATTATTGCTTGAGATTGTAAGCGGAAAGAAAAATAGAGATCTTTCATACACAAGCAATAGTTATAATCTCATTGGACTTGCATGGAGGTTGTGGAAACAAGGCAATCCAATGGAATTAATGGATGATTATTTAGGAGAGTCATATATTATATCTGAAGCTTTACGTTGCCTTCAAGTTGGTCTTTTATGTCTGCAACATCATCCAGATGATAGACCTAACATGGCAGCTGTAATTGTTATGCTAACCAATGAAATTGTTTTACCCCAACCAAAAGAGCCTGGCTTCTTAATAGAAAGAGTCATCCCTAATGAGGTAGAATCGTCTAGAACTTCAATTAATGAAGTGACTATTTCAATATTAGATGTCAGATAA 2487 0.3796 MATLPLMNVVVISKLIIIFFSPISLAIDTITQSQPLHDDGSTLISNHGTFELGFFSPGRSTNRYIGIWYKTIPVKTVVWVANRDNAIKNNNFSMLTISKEGNLVLVNNNHQTLWLSNITTTQPLKSPLVQLLDTGNLVLKENKKEESFLWQSFDHPCDTLLPGMKLGWDLKTGLNRKLTAWKSWDDPSSGNLSWGVLLSSNPELVLWNGSIEYHRSGPWNGPGFSGQPVLRMARIVDPNFVNNSNEVYYSYTLANKSMISITYLNQTLSHRQRMNWIPENNTWRVFESIPRDDCDLYNTCGPNGNCKDNETPICQCLEGFKPKSPQNWDMFDWTQGCVRSEPWRCGVRNQDGFQRFYSIKGPDTRNSWTNGNMTLEDCKVKCLENCSCMAYSNLDITGGGSGCSIWFGDLNDLKLITASQQDLYIRKAVPDIASNGDAKDGDKKKKDLIITITLVSALVLLLLVYYIYRARRKIRGMKDEIKNIISIEKVDKDEEHNLELPFFDFATIFNATNGFSDDNKLGQGGFGPVYKGTLLDGQEIAVKRLSKSSRQGVKEFKNEVILCAQLQHRNLVKVLGCCIEGEEKMLLYEYMPNKSLDSFLFDSTQSKLLDWSKRFHIMCAIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARICGDNQIEGNTNIIVGTYGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGKKNRDLSYTSNSYNLIGLAWRLWKQGNPMELMDDYLGESYIISEALRCLQVGLLCLQHHPDDRPNMAAVIVMLTNEIVLPQPKEPGFLIERVIPNEVESSRTSINEVTISILDVR* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0969 828 SUPERFAMILY Protein kinase-like (PK-like) 497 786 IPR011009 -
Apr2g0969 828 Pfam PAN-like domain 345 413 IPR003609 -
Apr2g0969 828 CDD STKc_IRAK 521 788 - -
Apr2g0969 828 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544
Apr2g0969 828 Gene3D Phosphorylase Kinase; domain 1 477 590 - -
Apr2g0969 828 ProSiteProfiles PAN/Apple domain profile. 345 429 IPR003609 -
Apr2g0969 828 Gene3D - 23 153 IPR036426 -
Apr2g0969 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 187 IPR036426 -
Apr2g0969 828 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 36 822 - -
Apr2g0969 828 Gene3D Transferase(Phosphotransferase) domain 1 591 792 - -
Apr2g0969 828 Pfam Domain of unknown function (DUF3403) 787 828 IPR021820 GO:0004674
Apr2g0969 828 SMART blect_4 33 156 IPR001480 -
Apr2g0969 828 Pfam D-mannose binding lectin 76 182 IPR001480 -
Apr2g0969 828 ProSiteProfiles EGF-like domain profile. 290 326 IPR000742 -
Apr2g0969 828 SMART serkin_6 515 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0969 828 ProSiteProfiles Bulb-type lectin domain profile. 27 152 IPR001480 -
Apr2g0969 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Apr2g0969 828 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 36 822 - -
Apr2g0969 828 SMART ntp_6 348 427 IPR003609 -
Apr2g0969 828 Pfam Protein tyrosine and serine/threonine kinase 518 783 IPR001245 GO:0004672|GO:0006468
Apr2g0969 828 PIRSF SRK 1 828 IPR024171 GO:0004674
Apr2g0969 828 CDD PAN_AP_plant 348 426 - -
Apr2g0969 828 ProSiteProfiles Protein kinase domain profile. 515 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0969 828 CDD B_lectin 39 156 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0969 Apr-Chr2 15860996 15865264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0969 431 801 Receptor kinase-like Gene Family AT4G23190 51.467 4.79e-126 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr2g0969 PK_Tyr_Ser-Thr 3.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0969 - - mtr:MTR_3g007630 1079.32