Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0962 ATGGGTTCCAAGAAGCCACAGTTAACACCAACAGAAACAATTCCCAATAACAACCAACAAGACCTTCCCACCATTGTTCTCCCTCAACTGTCAAAATCTAAGTCAAGTTCCAGCAACCCAGTTCAGAACCCTTTGATGATGTTGAACTCATCTTCATCCCGCAGAAGTGCCATGTCCATTCACTCTTCTGGGAGCTCTGGCAGGAGCAGGAGCAACAACAACTCCTTCCATGAAGTGACTTTCTCACGCTCAGGATCCAAACCTGTGAGGTATGGCTCAAAGGGTGGTGCTGATTCTGAAGGACTAAGCATGTCCCAGAAGGAACTAAGAGATGAAGATGCAAGGTTGGTGTACATAAACGACCTTGAGAAGACCAACCAGACTTTTGAGTTTGCTGGAAACTCAATCCAAACTGGGAAGTACTCAATCCTCACTTTCATTCCAAGGAACCTGTTTGAACAGTTCCATAGAGTTGCTTACATATATTTCCTCATAATAGCCATTCTCAACCAGCTTCCTCAGCTTGCAGTGTTTGGGAGGGGTGTTTCCATCTTGCCACTGGCCTTTGTCCTTCTTGTTACTGCTGTGAAAGATGCTTATGAGGATTGGAGGAGGCACAAGAGTGATAAAGTTGAGAACAACAGGTTAGCATCAGTTTTGGTTAATGGTAGATTTGTAGAGAAGAAATGGAAGGACATTAGAGTTGGTGAGATCACCAAAATCAATGCAAATGAAACCATACCTTGTGATATTGTGTTGCTCTCAACTAGTGATCCAACTGGGGTTGCATATGTGCAGACTATTAATTTAGATGGGGAATCAAATTTGAAGACTAGATATGCAAAACAAGAGACACATTTGAATAAGGAGGGGTTTAACTTTAGTGGGTTGATTAAATGTGAGAAACCCAATAGGAACATATATGGATTTCAGGCTAACATGGAAGTTGATGGCAAGAAGTTGTCGCTTGGATCATCCAACATTGTGCTTCGTGGATGTGAACTCAAGAATACTACTTGGGCACTTGGTGTTGCTGTGTATTGTGGCCGTGAGACCAAGGCCATGCTCAATAGTTCAGGAGCTCCATCTAAGAGGAGCAGGTTGGAGACACGCATGAACTTTGAGATCATCATGCTCTCTTTCTTCCTTGTGGCATTATGCACTGTCACGTCAGTTTGTGCTGCTGTGTGGTTGAAGCGCCACAAGGATGAGTTGAATCTCTTGCCATATTATAGGAAACTTGACTTCTCAGAAGAAGGGGAAGTGGAAAGCTATAAGTACTATGGATGGGGGTTGGAAATTTTCTTCACATTTCTCATGTCAGTTATAGTGTTCCAGGTCATGATTCCCATTTCCTTGTACATTTCCATGGAGCTTGTGCGTGTTGGTCAGGCTTACTTCATGATTGGAGACAACAGAATGTATGATGAGACAACAAAGTCAAGGTTTCAGTGCAGGGCTTTGAACATTAATGAAGATTTGGGGCAAATTAAGTATGTTTTCTCAGACAAAACTGGTACACTCACCGAGAACAAGATGGAGTTTCAATGTGCCAGCATATGGGGGGTTGATTACAGTTCTACAAAATCCAGCATAGAGGATGAGCAAGTTGAATATCCTGTGCAAGTAGATGGAAAGGTCTTGAGACCAAAGATGAAGGTGAAGGTTAATCCAGAGCTTTTGCAATTATCAAGAAGTGGAGTTGGGAATGAGGAGGGAAAACGAATTCGTGATTTCTTTCTAGCACTTGCAACCTGCAATACTATTGTGCCTCTTATTGTTGACACACCTGACCCTGATGTCAAGCTGATAGATTACCAAGGGGAATCACCAGATGAACAAGCATTAGCTTATGCTGCAGCTGCCTATGGTTTTATGCTTATAGAACGAACCTCGGGCCATATAGTCATTGATACTCATGGAGAAAGACAAAAGTTCAATGTCTTGGGTTTGCATGAATTTGACAGTGACCGAAAGAGGATGTCAGTTATCTTGGGGTACCCTGACAATTCTGTGAAAGTTTTTGTCAAAGGAGCAGACACATCCATGCTTAGTGTGATAAAAAAATCATTTAACATGGACCTAGTAAAAGCCACTGAAACCCATCTTCACTCTTTTTCTTCCATGGGTTTGAGGACACTTGTTATTGGGATGAGAGAGTTGAATGCTCCAGAATTTGAGCAATGGCATGCAGCCTTTGAGGCTGCGAGCACTGCTGTGTTTGGCAGGGCTGCTATGCTCCGTAAAGTTTCTAGCATTGTAGAGAACAATCTCACCGTATTGGGAGCATCTGCCATTGAAGATAAACTGCAACAAGGTGTGCCTGAAGCCATTGAATCTCTAAGGAGTGCAGGCATCAAAGTGTGGGTTTTGACTGGGGACAAACAAGAAACTGCCATATCCATTGGCTACTCCTCAAAGCTCCTAACAAGCCACATGACTCAAATTGTAATTAATAGCAACAATAGAGAGTCATGTAGAAAGAGTTTGCAAGATGCCCTTGTCATGGCTAAAAAGCTCGTGTCCACATCTGGGGTTACCAACAATGCTGGAGGAAGTTCTGATGCACCTACAACTCCAATAGCCTTGATCATTGATGGTACCAGCCTTGTGCATATTCTTGACAGTGAGCTTGAAGCACAGCTATTTCAACTAGCAAGTGAATGTTCTGTTGTTCTATGCTGTCGAGTTGCTCCACTGCAAAAGGCTGGGATTGTTGCCCTAGTGAAGAATAGGACATCTGACATGACGCTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAGGGTCGACAAGCTGTAATGGCATCAGATTTTGCAATGGGGCAGTTTAGATTTTTAGTTCCTCTCTTATTAATACATGGGCACTGGAATTACCAACGGCTGGGGTACATGATACTATACAATTTTTACAGAAATGCTGTCCTTGTTCTTGTACTATTTTGGTATGTCCTCTACACTGCCTTCACTTTGACAACTGCTATAAATGAATGGAGCACCACACTGTATTCAATAGTTTACAGTTCATTGCCAACTATTATTGTTGGCATTCTGGATAAGGATCTTGGTAAAAGGACTCTCCTAAAGTATCCTCAGCTTTATGGAGCTGGACAGAGACATGAGGCCTACGACAAAAAGTTATTTGTGTTGACAATGTTAGATACTTTGTGGCAAAGCATGGTTGTCTTCTGGGCCCCCCTCTTTGCATATTGGAGCAGCACTGTTGATGTGGCCGGCATAGGAGACCTTTGGACTTTTGGAGTTGTTATTTTGGTTAATTTACACTTGGCCATGGATGTCATAAGGTGGTATTGGATGACTCATGTTGCCATTTGGGGCTCCATTGTTGCAACTTTCGTTAGTGTCATGATCATTGATGCTATTCCCTCACTTCCTGGCTACTGGGCCTTCTTTCATGCTGCAGGAACTGGATTGTTCTGGTTATTGCTGCTCGGAATCGTGATAGCCGCATTGCTTCCTCGTTTGGTTGTAAAATTTGTTCATCAATATTATTTTCCTAATGATATTCAAATTTGTAGAGAAGCTGAGAAAGTTGGGTATGAGAGACTTGTTGAAAGTGGACAGATAGAAATGCTTCCCATCTCGAATAATCTACCAAGATGA 3666 0.4261 MGSKKPQLTPTETIPNNNQQDLPTIVLPQLSKSKSSSSNPVQNPLMMLNSSSSRRSAMSIHSSGSSGRSRSNNNSFHEVTFSRSGSKPVRYGSKGGADSEGLSMSQKELRDEDARLVYINDLEKTNQTFEFAGNSIQTGKYSILTFIPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAYEDWRRHKSDKVENNRLASVLVNGRFVEKKWKDIRVGEITKINANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETHLNKEGFNFSGLIKCEKPNRNIYGFQANMEVDGKKLSLGSSNIVLRGCELKNTTWALGVAVYCGRETKAMLNSSGAPSKRSRLETRMNFEIIMLSFFLVALCTVTSVCAAVWLKRHKDELNLLPYYRKLDFSEEGEVESYKYYGWGLEIFFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIGDNRMYDETTKSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTKSSIEDEQVEYPVQVDGKVLRPKMKVKVNPELLQLSRSGVGNEEGKRIRDFFLALATCNTIVPLIVDTPDPDVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDTHGERQKFNVLGLHEFDSDRKRMSVILGYPDNSVKVFVKGADTSMLSVIKKSFNMDLVKATETHLHSFSSMGLRTLVIGMRELNAPEFEQWHAAFEAASTAVFGRAAMLRKVSSIVENNLTVLGASAIEDKLQQGVPEAIESLRSAGIKVWVLTGDKQETAISIGYSSKLLTSHMTQIVINSNNRESCRKSLQDALVMAKKLVSTSGVTNNAGGSSDAPTTPIALIIDGTSLVHILDSELEAQLFQLASECSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSTTLYSIVYSSLPTIIVGILDKDLGKRTLLKYPQLYGAGQRHEAYDKKLFVLTMLDTLWQSMVVFWAPLFAYWSSTVDVAGIGDLWTFGVVILVNLHLAMDVIRWYWMTHVAIWGSIVATFVSVMIIDAIPSLPGYWAFFHAAGTGLFWLLLLGIVIAALLPRLVVKFVHQYYFPNDIQICREAEKVGYERLVESGQIEMLPISNNLPR* 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0962 1221 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 507 773 IPR023299 GO:0000166
Apr2g0962 1221 SFLD p-type atpase 485 971 IPR044492 -
Apr2g0962 1221 Pfam Cation transport ATPase (P-type) 605 685 - -
Apr2g0962 1221 SUPERFAMILY Calcium ATPase, transmembrane domain M 131 1187 IPR023298 -
Apr2g0962 1221 MobiDBLite consensus disorder prediction 1 106 - -
Apr2g0962 1221 Gene3D - 606 738 IPR023299 GO:0000166
Apr2g0962 1221 ProSitePatterns E1-E2 ATPases phosphorylation site. 503 509 IPR018303 -
Apr2g0962 1221 CDD P-type_ATPase_APLT_Dnf-like 133 1080 - -
Apr2g0962 1221 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 13 1221 - -
Apr2g0962 1221 MobiDBLite consensus disorder prediction 1 82 - -
Apr2g0962 1221 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 433 522 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g0962 1221 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 891 1006 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr2g0962 1221 PRINTS P-type cation-transporting ATPase superfamily signature 501 515 - -
Apr2g0962 1221 PRINTS P-type cation-transporting ATPase superfamily signature 920 939 - -
Apr2g0962 1221 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 131 1195 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr2g0962 1221 SFLD C1.7: P-type atpase like 485 971 - -
Apr2g0962 1221 SUPERFAMILY Calcium ATPase, transduction domain A 214 354 IPR008250 -
Apr2g0962 1221 SUPERFAMILY HAD-like 488 961 IPR036412 -
Apr2g0962 1221 Gene3D - 187 357 - -
Apr2g0962 1221 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 13 1221 - -
Apr2g0962 1221 Pfam Phospholipid-translocating P-type ATPase C-terminal 948 1188 IPR032630 -
Apr2g0962 1221 Gene3D - 757 960 IPR023214 -
Apr2g0962 1221 Pfam Phospholipid-translocating ATPase N-terminal 117 182 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0962 Apr-Chr2 15748260 15753986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0962 64 1212 Primary Pumps ATPases AT5G04930 68.783 0.0 1689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0962 K14802 - gmx:100813982 2012.27