Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0953 ATGGATATAGATCTTCGGTTACCTTCTGGTGAACATGATAAAGAGGATGAAGAAACAACTACAATTGATAAATTGTTGGACAGTGAAGAAAAGATGCATAATGGAGGTATAGATGGCAGAAATATAGTTGATACTGGTATTGAGGTTCATGCTCTAAATGGAGGAGATTTGAATTCACCAACAGTTGATATGGTAGTGTTTAAGGAAGATACAAATCTTGAGCCACTTTCTGGCATGGAATTCGAGTCTCACGGGGAAGCTTATTCTTTCTACCAAGAATATGCTCGGTCAATGGGATTCAACACTGCTATACAAAATAGTCGCCGTTCAAAAACATCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACAAAACGTGAGTATGATAAATCATTCAATCGACCACGTGCACGACAAAACAAACAAGATTCTGAAAATTCAACTGGTAGAAGGTCTTGCTCCAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGCCAGATGGAAAATGGGTTATACACAGCTTCGTGAGGGAGCATAATCATGAACTTTTACCAGCCCAAGCAGTCAGTGAACAAACAAGAAGAATGTATGCTGCGATGGCTAGGCAGTTTGCTGAATACAAAACTGTTGTTGGTCTCAAGAATGAGAAGAATCCGTTTGATAAAGGTCGGAATTTGGGCCTGGAGTCAGTGGAGGCTAAACTCATGCTTGATTTTTTCATACAGATGCAAAACATGAATTCTAACTTCTTTTATGCAGTAGATCTTGGTGAGGATCAACGCCTGAAAAATCTTTTATGGATTGATGCCAAAAGTAGGCATGACTACATCAACTTTTGCGATGTAGTATCATTTGACACCACCTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTGAACCAGCACTACCAATTTATATTACTTGGGTGTGCCTTGATATCAGATGAAAGTGCCGCCACCTTTTCTTGGCTATTACGGACGTGGCTGAAAGGAGTTGGTGGTCAAGTTCCAAAAGTGATAATTACTGACCACGACAAGACTTTGAAGTCAGTTATTTCAGATATCTTTCCTAGTGCTTGTCATTGTGTTTCCTTATGGCATATATTTGGGAAGGTATCTGAAAATTTGGGTCCTGTAATTAAAAAGCATGAGAATTTTATGGCAAAATTTGAAAAATGCATACATAGGTCCTTGACCAGTGATGATTTTGAGAAAAGATGGTGGAAAATTATTGATAGGTTTGAACTTCGAGAGGATGAATGCATGCAGTCATTGTATGAAGATCGTAAGTTATGGGCACCAACATTAATGAAGGATGTTTTCTTAGGTGGTATGTCTACTGTCCATCGATCTGAAAGTGTAAATTCATTCTTTGACAAATATGTTCATAAGAAGACTTCTGTCCAAGATTTTGTAAAACAGTATGAAGCAATCTTGCAAGACAGGTATGAAGAGGAAGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAACATTGAAAACTCCTTCTCCTTTAGAGAAGAGTGTTGCAGGGATTTGCACACATGCTGTATTCAAGAAGATTCAAGCTGAGGTTGTAGGAGCAGTTGCTTGTCATCCTAAAGCTGACAGGCAGGATGATACAATTATTGTTCACCGGGTTCAGGATATGGAAACGAATAAAGACTTCTTTGTTGTGGTTAATGAAGTAAAGTCAGAGTTGTCGTGTATATGTCGGCTATTTGAATATAGAGGTTATCTTTGTCGACATGCATTGGTTGTTCTTCAATATTCTGGACATTCTGTGTTCCCATCTCAATATATTTTGAAACGGTGGACAAAAGACGCAAAGCTCCGGAATATAATGGGAGAAGAATCTGAACATATGCTGACTAGAGTGCAACGATACAATGATTTATGTCACCGAGCACTAAAACTGAGTGAAGAGGGATCGTTGTCTCAAGAGAGTTATAGTTTAGCATTCCATGCACTGCATGAAGCACACAAAAGTTGTGTGAGTGTTAACAATTCTAGTAAGTGTCCTACAGAACCTGGTACATCAGGCGCTCATGGTCAGCTTTCTACTGAAGAAGATACCCAAAGTAGAAATATGGGCAAGTCAAGCAAAAAGAAGAATCCAACTAAAAAGAAAAAGGTGAACTCTGAAGCGGAAGTGATGACAGTTGGGGCACTCGACAACTTGCAACAAATGGACAAATTCAGCACAAGAGCTGCAGTAACCCTTGAAGGTTATTATGGCACACAACAGAGCGTACAGGGGATGTTGAATTTAATGGGACCAACACGTGATGATTACTATGGGAATCAACAGACACTTCAGGGGCTGGGACCAATAAGTTCGATACCAACCAGTCACGATGGTTATTATGGTGCACATCAGGGCATGGCTGGTCTGGCACAACTGGATTTTTTGCGAACTGGTTTCACGTATGGCATTCGGGATGATCCTAATGTGAGAGCAGCACAGTTGCATGAGGATCCATCAAGACATGCATAA 2532 0.3957 MDIDLRLPSGEHDKEDEETTTIDKLLDSEEKMHNGGIDGRNIVDTGIEVHALNGGDLNSPTVDMVVFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKQDSENSTGRRSCSKTDCKASMHVKRRPDGKWVIHSFVREHNHELLPAQAVSEQTRRMYAAMARQFAEYKTVVGLKNEKNPFDKGRNLGLESVEAKLMLDFFIQMQNMNSNFFYAVDLGEDQRLKNLLWIDAKSRHDYINFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGCALISDESAATFSWLLRTWLKGVGGQVPKVIITDHDKTLKSVISDIFPSACHCVSLWHIFGKVSENLGPVIKKHENFMAKFEKCIHRSLTSDDFEKRWWKIIDRFELREDECMQSLYEDRKLWAPTLMKDVFLGGMSTVHRSESVNSFFDKYVHKKTSVQDFVKQYEAILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGICTHAVFKKIQAEVVGAVACHPKADRQDDTIIVHRVQDMETNKDFFVVVNEVKSELSCICRLFEYRGYLCRHALVVLQYSGHSVFPSQYILKRWTKDAKLRNIMGEESEHMLTRVQRYNDLCHRALKLSEEGSLSQESYSLAFHALHEAHKSCVSVNNSSKCPTEPGTSGAHGQLSTEEDTQSRNMGKSSKKKNPTKKKKVNSEAEVMTVGALDNLQQMDKFSTRAAVTLEGYYGTQQSVQGMLNLMGPTRDDYYGNQQTLQGLGPISSIPTSHDGYYGAHQGMAGLAQLDFLRTGFTYGIRDDPNVRAAQLHEDPSRHA* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0953 843 MobiDBLite consensus disorder prediction 679 706 - -
Apr2g0953 843 MobiDBLite consensus disorder prediction 132 164 - -
Apr2g0953 843 MobiDBLite consensus disorder prediction 679 727 - -
Apr2g0953 843 Pfam MULE transposase domain 288 380 IPR018289 -
Apr2g0953 843 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 778 IPR031052 GO:0006355
Apr2g0953 843 Pfam FAR1 DNA-binding domain 89 191 IPR004330 -
Apr2g0953 843 Pfam SWIM zinc finger 569 602 IPR007527 GO:0008270
Apr2g0953 843 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
Apr2g0953 843 PANTHER FAR-RED ELONGATED HYPOCOTYLS 3-RELATED 47 778 - -
Apr2g0953 843 SMART 26again6 579 606 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0953 Apr-Chr2 15601382 15608977 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr2g0953 FAR1 5.7e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0953 - - gmx:100817034 1608.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0953 2 15601382 15608977 Apr2g0953 2 15601382 15608977 ECH
Apr2g0953 2 15601382 15608977 Apr5g0864 5 12684194 12692566 PCT