Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0933 ATGGGTTTTGAACCATTGGTTTGGTACTGCCAGCCAGCACAAAACCGCATTTGGGGTAGAGTGGTAGATAGTGTTTTTGGGTCATATACACCTTGTGCAATTGACACTCTTGTTGTGTCTACTTCCAATTTGGTTCTTATGGGTCTGTGCTTATATAGAATATGGCTTACCATTTACAATGCCAAAGCTCAAAGGCTTTGTTTGAGTTCAAATTACTATAATTATCTTCTGGGAATTTTGGCTGGTTGTTGTGCTGCTCAACCTTTGTTGAGATTTCTAACTGGAAATTCAGCTTTCAACCTGAATGGGGAAACTGGCTTTGCTCCTTTTGAGATAACAGCTTTGATAGTTGAGGCACTTACTTGGAGCACAATGATAATTCTCATTCTATTGGAAACCAAGGTTTATATCCGGAAATTTAGATGGATGGTGCGGTTTGGAGTTATTTATGTCTTGGTGGGCGATATTGTAATGCTTAACCTTCTTTTGTCAGCTAAAGATTACTGTAGCAGATTTGCCCTGTTTCTGTACATCAGCCCTGTTATCTGCCAGGTGTTGTTTGGTACCTTACTTTTTGTTTACATTCCCAATTTGGTTCCTTATTCTGGCCATATAACTATGCAAGCTGAGTTTCCTGTCCATGGTGAATATGAACCACTTTGTGGAGAAGATCAAGTTTGTCCTGAGAGGCATGCCAATGTGTTCTCTAGATTATGCTTTGGATGGATTAGTCCCCTCATGAGCCAAGGCTACAGAAAACCCGTCACTGAAAAGGATGTTTGGAAGCTAGACACATGGGATCAAACAGAGACATTAACTGAAAAGTTCCAAGAGTGTTGGATGTTCGAATTTCAAAGGCCCAACCCTTGGCTTTTAAGAGCATTGAACAATAGCCTAGGGAAAAGGTTTTGGTGGGGAGGCATCTATAAGATTGGTAATGATCTTTCTCAGTTTGTGGGCCCTATTTTGCTGAACCATCTCTTAGATTCAATGCAAAGAGGAGACCCATCTTGGATAGGTTACATCTACGCCTTCTCCATTTTTGTTGGAGTGACAGTTGGTGTTCTATGTGAAGCACAGTATTTCCAGAATGTTATGCGTGTTGGTTTTCAGCTTAGATCAAGTTTGGTGGCTGCTATATTTAGAAAATCTTTGAGGCTAACAAATGATGGTAGAAAGAAGTTCACATCTGGGAAGCTTATGAATATGATAACAACAGATGCCAGTTCATTACAGCAAATATGTCAACAACTTCATGGACTATGGTCATCACCATTCCGTATCATCATAGCTATGGTTCTCCTATACCAGCAACTAGGTGTTGCTTCACTTATTGGAGCATTAATGCTAGTTCTTATTATCCCACTGCAGACATTTGTGATTTTCAAAATGCGAAAGCTGACAAAAGAAGGAATACAACAGACAGACAAGAGGGTCGGTCTCATGAATGAAATTCTGGCTGCCATGGATACTGTAAAATGTTATGCGTGGGAAACAAGCTTTCAATCTAGAATTCTAAGCATACGAGATGAAGAGCTATCATGGTTTCGCAAAGCACAGCTCCTATATGCTCTTAACACTTTCATACTAAACAGCATCCCTGTTCTTGTGACGGTGACCACATTTGGTATTTTTACTTTACTGGGCGGAGAATTGACACCTGCAAGGGCATTTACCTCGTTATCTCTGTTTACGGTTTTGCGTTTTCCTTTAAATATGCTACCAAGCCTTCTAAGTCAGGTAGCAAGTGCAAATGTCTCATTGCAACGTTTGGAGGAATTGCTCTTAGCAGAGGAGCGAAATTTACAGCAAAATCCACCTATTGAACCAGGACTTCCTGCCATCACAATTAAGAATGGATACTTTTCGTGGGATCTTAAGGCAGAGAAACCCACGTTATCAAATATCAATGTGGAAATACCAATTGGAAGCTTAGTTGCAATCATTGGCGGTACTGGAGAAGGCAAAACATCACTTATTTCAGCAATGATTGGAGAGCTACCTCCTCTAGCTGATGGAAATGCCACAATCAGAGGGACAGTTGCTTATGTTCCTCAGATTTCATGGATTTACAATGCCACAGTTCGTGAAAATATATTGTTTGGATCGAAATTTGAAAAAGAAAGATATTGGAAGACCATTGATGTCACTGCTTTACAGCATGATCTCAACTTACTACCTGGACGTGATTATACCGAGATTGGAGAAAGAGGAGTCAATATTAGTGGTGGACAAAAACAAAGAGTTTCCTTAGCTAGGGCTGTATACTCAAATTCAGATGTATATATTTTTGATGATCCTTTAAGTGCTCTTGATGCTCATATTGCTCAAGAGGTTTTCAGGAATTGCATAAAGGAAGGATTGCGAGATAAAACTAGGGTTCTTGTCACCAACCAACTGCATTTTCTCCCTCAGGTGGATAAAATCATTCTGGTCAGTGAAGGCATGATTAAGGAGCAGGGAACCTTTGAGGAGCTATCAAAAAGTGGGCTTCTATTTCAAAAACTAATGGAAAATGCAGGGAAAATGGAACAACAAGCAGACAGTAATGAAGAGAGAGATAGTCATGACAAGGCTAATGATTTACCCTTCAAGAATGAGGCAATTGTGGAATTACCAAATGATGCAAGCTATGAGAAGAAAGGAAAATTACAAAAATCAGTACTGATTAAGCAAGAAGAGCGGGAGACAGGGGTGATTAGCTGGAAAGTTATAACACGGTACAAATCTGCTCTAGGAGGACTGTGGGTAGTTTTCATACTCTTTGCTTGCTATACATTAACAGAAGTTCTTCGAATTTCAAGTAGTACATGGTTAAGTGTTTGGACATCTCAAGATTCCACTGCTGATTATGAACCGGGATATTTTCTTTTGATCTATGCACTTTTCTCATTTGGACAGGTTTTTGTGGCACTTGCAAACTCTTATTGGTTGATCATTTCAAGTCTTCGTGCTGCCAAAAGATTGCATGATGCAATGCTTGAAAAAATCCTCCGGGCTCCCATGTTATTCTTCCAAACTAATCCTGTTGGTCGCATAATTAATAGGTTTGCAAAAGACATGGGAGATATAGATACCAATGTTTTTAATTTGGTGAATATGTGTTTGGGACAACTCTGGCAAATTCTTTCGACATTTGCTCTTATAGGCACTGTGAGCACCATATCCCTGTGGGCCATAATGCCACTTCTGATATTCTTTTATGCAGCTTACATATATTACCAGAGCACAGCTCGAGAGATAAAGCGCTTGGATTCCATTACGAGATCTCCTATTTATGCACATTTTGGAGAAACACTTAATGGTTTGTCAAGCATTCGCGCATATAAAGCATATGACAGGATGACACATGTCAATGGAAAATTAATGGATGACAACATAAGATTTAATCTTCTGAATATTAGTTTGAATCGTTGGCTGACTATAAGGCTACAAACATTAGGAGGCCTCATGATTTGGTTGGTAGCAACATTTACTGTGGTGCAGAATGGAAGAGCAGAAAACCAGGCAATGTTTGCATCTACAATGGGTCTACTTCTCAGTTATACTTTGAATATAACAACTCTCTTGAGTGGTTTCCTCAGACAAGCTAGTAAAGCTGAAAACAGTTTAAATGCTGTTGAGCGTGTTGACACATATATAAATTTAGAAACTGAGGCTCCTGGTGTAATTGAGACAAACCGTCCACCACCAGGATGGCCAACATCAGGATCTATTGAGTTTGAGGATGTTGTTCTGAGATACAGGCCTGAACTTCCTCCAGTGCTGCATGGATTTTCCTTTACAGTTCCTCCAACTGAGAAGATTGGGGTAGTTGGAAGAACTGGTGCAGGAAAGTCTAGCATGCTTAATGCATTATTCCGGATTGTGGAGCTGCAAACCGGAAAGATCATTATTGATGGTTATGATATTTCTACATTTGGGCTAGCAGACTTACGAAGTGTTCTCACTATCATACCACAATCACCAGTTCTTTTCTCCGGAACTGTTCGATTCAACCTTGATCCATTTAATGAACATAATGATGCTGACTTATGGGAAGCTTTAGAAAGGGCACATTTGAAGGATGTCATAAGAAGAAATTCGTTTGGTCTAGATGCTCAGGTTTCAGAGGGAGGAGACAATTTTAGTGTTGGTCAGAGGCAACTGTTAAGCCTAGCTAGAGCATTGCTGCGAAGATCAAAGCTTCTGGTCCTGGATGAAGCCACTGCTGCTGTAGATGTTAGAACTGATGCCCTCATACAGAAAACTATCCGAAAAGAATTTCAGTCCTGCACAATGCTCATCATTGCACACAGATTAAATACAATTATTGACTGCAATCGGATTCTGTTTCTTGATGATGGCCGGGTTCTTGAATACAGTTCCCCAGAGGAACTCTTACAAAATGAAGGAACTGCTTTCTACAAGATGGTTCAAAGTACTGGACCTGAAAATGCTCAGTATTTATGTAGCCTAGTATTTGGAAGGACAGAGAACAACTCTAATGAATGCAGAAAGGAAATGGAAAGACATATGAAACAGTTAGCTTCTACCCACTGGACTGCTGCTACCCAGTTTGCCATATCTGCTACCCTTTCTTCATTACAGCATCACCTTCAAGGTCCAAGTAATAAAGACAATAAAGATTTCCTTGATAAAATAAAGGATGCACTGACAACACTTCAGGAAGTTCTAGAGGGGAAGCATGATGAAGACATTGAAGAGACACTAACAAAACACCATCTTTCTAGTGATAGCTGGTGGTCTACTCTCTATTAA 4761 0.3993 MGFEPLVWYCQPAQNRIWGRVVDSVFGSYTPCAIDTLVVSTSNLVLMGLCLYRIWLTIYNAKAQRLCLSSNYYNYLLGILAGCCAAQPLLRFLTGNSAFNLNGETGFAPFEITALIVEALTWSTMIILILLETKVYIRKFRWMVRFGVIYVLVGDIVMLNLLLSAKDYCSRFALFLYISPVICQVLFGTLLFVYIPNLVPYSGHITMQAEFPVHGEYEPLCGEDQVCPERHANVFSRLCFGWISPLMSQGYRKPVTEKDVWKLDTWDQTETLTEKFQECWMFEFQRPNPWLLRALNNSLGKRFWWGGIYKIGNDLSQFVGPILLNHLLDSMQRGDPSWIGYIYAFSIFVGVTVGVLCEAQYFQNVMRVGFQLRSSLVAAIFRKSLRLTNDGRKKFTSGKLMNMITTDASSLQQICQQLHGLWSSPFRIIIAMVLLYQQLGVASLIGALMLVLIIPLQTFVIFKMRKLTKEGIQQTDKRVGLMNEILAAMDTVKCYAWETSFQSRILSIRDEELSWFRKAQLLYALNTFILNSIPVLVTVTTFGIFTLLGGELTPARAFTSLSLFTVLRFPLNMLPSLLSQVASANVSLQRLEELLLAEERNLQQNPPIEPGLPAITIKNGYFSWDLKAEKPTLSNINVEIPIGSLVAIIGGTGEGKTSLISAMIGELPPLADGNATIRGTVAYVPQISWIYNATVRENILFGSKFEKERYWKTIDVTALQHDLNLLPGRDYTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDAHIAQEVFRNCIKEGLRDKTRVLVTNQLHFLPQVDKIILVSEGMIKEQGTFEELSKSGLLFQKLMENAGKMEQQADSNEERDSHDKANDLPFKNEAIVELPNDASYEKKGKLQKSVLIKQEERETGVISWKVITRYKSALGGLWVVFILFACYTLTEVLRISSSTWLSVWTSQDSTADYEPGYFLLIYALFSFGQVFVALANSYWLIISSLRAAKRLHDAMLEKILRAPMLFFQTNPVGRIINRFAKDMGDIDTNVFNLVNMCLGQLWQILSTFALIGTVSTISLWAIMPLLIFFYAAYIYYQSTAREIKRLDSITRSPIYAHFGETLNGLSSIRAYKAYDRMTHVNGKLMDDNIRFNLLNISLNRWLTIRLQTLGGLMIWLVATFTVVQNGRAENQAMFASTMGLLLSYTLNITTLLSGFLRQASKAENSLNAVERVDTYINLETEAPGVIETNRPPPGWPTSGSIEFEDVVLRYRPELPPVLHGFSFTVPPTEKIGVVGRTGAGKSSMLNALFRIVELQTGKIIIDGYDISTFGLADLRSVLTIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSFGLDAQVSEGGDNFSVGQRQLLSLARALLRRSKLLVLDEATAAVDVRTDALIQKTIRKEFQSCTMLIIAHRLNTIIDCNRILFLDDGRVLEYSSPEELLQNEGTAFYKMVQSTGPENAQYLCSLVFGRTENNSNECRKEMERHMKQLASTHWTAATQFAISATLSSLQHHLQGPSNKDNKDFLDKIKDALTTLQEVLEGKHDEDIEETLTKHHLSSDSWWSTLY* 1587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0933 1586 Gene3D - 1223 1475 IPR027417 -
Apr2g0933 1586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1229 1472 IPR027417 -
Apr2g0933 1586 CDD ABCC_MRP_domain1 615 815 - -
Apr2g0933 1586 PANTHER ABC TRANSPORTER C FAMILY MEMBER 11-RELATED 38 1494 - -
Apr2g0933 1586 Gene3D ABC transporter type 1, transmembrane domain 285 595 IPR036640 GO:0005524|GO:0016021
Apr2g0933 1586 Gene3D ABC transporter type 1, transmembrane domain 880 1220 IPR036640 GO:0005524|GO:0016021
Apr2g0933 1586 Pfam ABC transporter transmembrane region 918 1174 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr2g0933 1586 Pfam ABC transporter transmembrane region 307 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr2g0933 1586 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Apr2g0933 1586 Pfam ABC transporter 1256 1404 IPR003439 GO:0005524
Apr2g0933 1586 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524
Apr2g0933 1586 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 839 IPR003439 GO:0005524
Apr2g0933 1586 CDD ABC_6TM_ABCC_D2 918 1214 IPR044726 GO:0140359
Apr2g0933 1586 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 919 1202 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr2g0933 1586 ProSitePatterns ABC transporters family signature. 1376 1390 IPR017871 GO:0005524
Apr2g0933 1586 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1473 IPR003439 GO:0005524
Apr2g0933 1586 SMART AAA_5 642 822 IPR003593 -
Apr2g0933 1586 SMART AAA_5 1265 1444 IPR003593 -
Apr2g0933 1586 CDD ABCC_MRP_domain2 1237 1457 - -
Apr2g0933 1586 SUPERFAMILY ABC transporter transmembrane region 913 1219 IPR036640 GO:0005524|GO:0016021
Apr2g0933 1586 Coils Coil 581 601 - -
Apr2g0933 1586 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr2g0933 1586 CDD ABC_6TM_ABCC_D1 305 590 IPR044746 GO:0140359
Apr2g0933 1586 SUPERFAMILY ABC transporter transmembrane region 289 595 IPR036640 GO:0005524|GO:0016021
Apr2g0933 1586 Gene3D - 596 865 IPR027417 -
Apr2g0933 1586 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 38 1494 - -
Apr2g0933 1586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 838 IPR027417 -
Apr2g0933 1586 Coils Coil 833 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0933 Apr-Chr2 15169748 15200094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0933 602 829 Calmodulin-binding Proteins AT2G36910 27.778 3.18e-21 99.4