Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0932 ATGGCAACAAAAGTACTCATTAAAATCCTAAGATTTCTTGGCTTCATGATACTCTTCACCCCATCAAATGCACAATCCCCATACTATGTGGGTGATGACTGCCAGAACTCAACAGAACATGCCCTCACCTCAACATACCAAACCAACCTTCGGAACACCCTCACATGGCTCTCCTCAGATGCTGCCACAAGCAAGGGATACAACCACACAACCATAGGAAGTGGCACAGTTGATGTCGTGTATGGCCTCTATGATTGCAGGGGTGATGTCACAGGAACTTTCTGCCAGTTTTGTGTCTCCACTGCAGCCTCAGAAATCCTTCAACGCTGTCCAAACAGATCCTCAGCAGTTATATGGTACAGCTACTGTATTTTAAGGTACTCAAACCATGATTTCATAGGGAAACTTAACACAACCTCATCATGGACAATTCCGGGGTCCAAGAACGCCACTGATCCAAAAGAGCTTCAGAAAGCTGAGGATTTTATGCAAAGTTTGAGAAGAAAAGCTACTGTGGATACCAACAAGTTGTATGCAATGGGAGGGTTCAATTTGAGTAATTCTGAGGAAAGGTTTGGGTTGGTGCAGTGCAGTAGAGACATTACTAGTGATGAGTGCAGCCAGTGTTTGGAGGCCATGATAGACAAAGTTCCTCAATGTTGTGGGACAAAGATAGGATGGCAAGTTTTGTCTCCAAATTGTCTTATAAAGTATGATGATTTTATCTTCTACCAGATTATTAGTCAAACATCTTCTCCTTTGCCTAATCCAGATGGACTGCTATCAGAGACCACTCCTATATCTCTTCATGATCATATTCAAAGAGAGGATACACTGAATGCAGATCTTCCTACAATCCCCTTAATTTGGATTCGTCAGAGCACAAATAACTTTTCAGAGTTTTGCAAACTAGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGTAATTTAGAAGATGGAACAGAAATTGCCGTCAAAAGACTCTCAAAAACATCTGGTCAAGGTTTAGAGGAGTTCAAGAATGAAGTAATCTTCATAGCTAAACTCCAACATAGGAACCTTGTGAGACTCTTGGGTTGCTGCATTGAGGAAAATGAAAAGCTGCTTGTATATGAGTACATGCCAAATTCTGGCCTTGACTCTCTCCTGTTCAATGAGGAAAAGCGAAAGCAACTAGATTGGAAATTAAGGCTGAGTATTATCCATGGAATTGCAAAAGGACTTCTATACCTTCATGAAGATTCTAGACTTAGAGTGATCCATAGAGATCTGAAAGCCAGCAATGTGCTTCTGGATCAAGAGATGAATCCAAAAATATCAGATTTTGGATTAGCAAGGACATTTGAGAAGGGCCAAAGTCAGGAAAACACAAATAGAGTCATGGGCACCTATGGATATATGGCTCCAGAATATGCTATGGAAGGGTTATATTCAGCAAAATCTGATGTTTTCAGCTTTGGAGTTCTTCTATTAGAAATCATTTGTGGGAAAAGGAATAGTGGATTCTATCTCTCAGAACATGGTCAAAGTCTTCTTGTATATAGTTGGAGACTCTGGTGTGAAGGAAAAAGTTTGGAACTATTAGATCCAATACTGGAAAAGACATACAAAGCCAGTGAAGTTATGAAGTGCATACACATTGGTTTGTTGTGTGTACAGGAAGATGCAACAGACAGACCAACCATGTCCACTGTTGTTGTCATGCTAGCAAGTGACACAATGACTCTTCCCAGTCCTAATCATCCTGCATTTTCAGTTGGAAGAAAGATCAAGGAAGAAGAATCAACATCAAAAGCTTCCAAGGATGCTTCTGTTAATGAGGTAACAGTATCAAACGTTTTACCAAGGTAA 1851 0.4057 MATKVLIKILRFLGFMILFTPSNAQSPYYVGDDCQNSTEHALTSTYQTNLRNTLTWLSSDAATSKGYNHTTIGSGTVDVVYGLYDCRGDVTGTFCQFCVSTAASEILQRCPNRSSAVIWYSYCILRYSNHDFIGKLNTTSSWTIPGSKNATDPKELQKAEDFMQSLRRKATVDTNKLYAMGGFNLSNSEERFGLVQCSRDITSDECSQCLEAMIDKVPQCCGTKIGWQVLSPNCLIKYDDFIFYQIISQTSSPLPNPDGLLSETTPISLHDHIQREDTLNADLPTIPLIWIRQSTNNFSEFCKLGEGGFGPVYKGNLEDGTEIAVKRLSKTSGQGLEEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLVYEYMPNSGLDSLLFNEEKRKQLDWKLRLSIIHGIAKGLLYLHEDSRLRVIHRDLKASNVLLDQEMNPKISDFGLARTFEKGQSQENTNRVMGTYGYMAPEYAMEGLYSAKSDVFSFGVLLLEIICGKRNSGFYLSEHGQSLLVYSWRLWCEGKSLELLDPILEKTYKASEVMKCIHIGLLCVQEDATDRPTMSTVVVMLASDTMTLPSPNHPAFSVGRKIKEEESTSKASKDASVNEVTVSNVLPR* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0932 616 MobiDBLite consensus disorder prediction 601 616 - -
Apr2g0932 616 SMART serkin_6 298 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0932 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Apr2g0932 616 Pfam Domain of unknown function (DUF3403) 571 616 IPR021820 GO:0004674
Apr2g0932 616 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Apr2g0932 616 SUPERFAMILY Protein kinase-like (PK-like) 284 584 IPR011009 -
Apr2g0932 616 MobiDBLite consensus disorder prediction 586 600 - -
Apr2g0932 616 Gene3D Phosphorylase Kinase; domain 1 263 373 - -
Apr2g0932 616 ProSiteProfiles Gnk2-homologous domain profile. 28 132 IPR002902 -
Apr2g0932 616 Pfam Protein tyrosine and serine/threonine kinase 303 568 IPR001245 GO:0004672|GO:0006468
Apr2g0932 616 CDD STKc_IRAK 304 569 - -
Apr2g0932 616 ProSiteProfiles Protein kinase domain profile. 298 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0932 616 Pfam Salt stress response/antifungal 158 239 IPR002902 -
Apr2g0932 616 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Apr2g0932 616 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 250 - -
Apr2g0932 616 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 258 613 - -
Apr2g0932 616 Gene3D - 139 243 IPR038408 -
Apr2g0932 616 Gene3D - 29 132 IPR038408 -
Apr2g0932 616 MobiDBLite consensus disorder prediction 586 616 - -
Apr2g0932 616 Gene3D Transferase(Phosphotransferase) domain 1 374 577 - -
Apr2g0932 616 PANTHER PROTEIN KINASE DOMAIN 19 250 - -
Apr2g0932 616 PANTHER PROTEIN KINASE DOMAIN 258 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0932 Apr-Chr2 15138469 15142876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0932 7 616 Receptor kinase-like Gene Family AT4G05200 40.686 4.02e-171 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr2g0932 PK_Tyr_Ser-Thr 6.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0932 - - ahf:112718031 879.011