Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0926 ATGAGGAAGAAACTCGATACCCGTTTCCCCGCTGCTCGGATAAAGAAAATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTAGCAGTTCCTGTTTTAGTATCTAAAGCTCTGGAGTTATTCTTGCAAGATCTTTGTGATCGCACCTACGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAATGCATTGCATTTGAAACATTGTGTACAAAGTTATAATGTCTTTGACTTTCTGAGAGACATTGTCAGCCGGGTTCCTGATTATGGGCATGGACATGGCCATGGCCATGGCCATTCGGAGGTTGGGGCTGATGATCGTGCCCTTCCAAAGAGAAGGAAAGCTGTTGGTGATGATGGCAATGATAGTGATGAAGAGACTAAGAGGAGTAAGATGCATGAGTTGGGGCACACTGGTACTACTGGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGCCGTGGTCGAGGAGCTCGAAATGTAGAAAGAGAGGCCAGTCATCAGCAGGTTGAATCTGAGCCTTGTACCTCAGTCCACCAAAGTAGCAAAGATATTCCTAATACAACTGTAGCAATAGATGATCCAGAATCCAAGGAGTTATCAAAGGAGAACACTGCAGTTTCTGAGGAAAGTACTCAATCTTTCCGTAACATTGATTTGAATGCCAACTTAAATGAAAATGAAGACAAAAATACCAGCGTAGCAGCTCAGGCCTCATTGCCTGAACCTGCGGCAACAGAAATTAAGCATGAAGAAATTCCGGGTTGGTCCCTTTCTGATGTGGACAAGATGGCCATTGACACTATGCAGCTTGCTAACCTTGGCAATAGGCTACAAGAGGATGAGGAAGATTATGATGAGGAAGGATAA 870 0.446 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVSRVPDYGHGHGHGHGHSEVGADDRALPKRRKAVGDDGNDSDEETKRSKMHELGHTGTTGRGRGRGRGRGRGRGARNVEREASHQQVESEPCTSVHQSSKDIPNTTVAIDDPESKELSKENTAVSEESTQSFRNIDLNANLNENEDKNTSVAAQASLPEPAATEIKHEEIPGWSLSDVDKMAIDTMQLANLGNRLQEDEEDYDEEG* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0926 289 SUPERFAMILY Histone-fold 4 97 IPR009072 GO:0046982
Apr2g0926 289 MobiDBLite consensus disorder prediction 91 212 - -
Apr2g0926 289 MobiDBLite consensus disorder prediction 155 169 - -
Apr2g0926 289 MobiDBLite consensus disorder prediction 91 141 - -
Apr2g0926 289 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Apr2g0926 289 PANTHER HISTONE SUPERFAMILY PROTEIN 1 288 - -
Apr2g0926 289 MobiDBLite consensus disorder prediction 170 188 - -
Apr2g0926 289 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Apr2g0926 289 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 288 - -
Apr2g0926 289 Coils Coil 271 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0926 Apr-Chr2 15026900 15035061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0926 1 278 CCAAT-HAP5 Transcription Factor Family AT3G12480 50.865 2.92e-83 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Apr2g0926 CBFD_NFYB_HMF 1.3e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0926 K21752 - gmx:100810093 462.225