Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0923 ATGGCAGAAATTGTGGTTTCGTTTGCTTTGGAGCAAGTGGTCCAACTCTTGCATGAAGAGGCAACTCTAATTGGAGGAGTGCATAAAGAATTTGTAGAGATAAAAAATGAACTACAAATCATTCAAAACTTCCTTAAAGATGCAGATAGAAGGGCTTCTGATGAGGAAAATTTGGAGAATGGAATCAAAATTTGGGTGAAAAAGTTGAGAGAATTATCTTTCCGCATAGAAGACGTCATTGCTGAGTACAACATTTATGTTGCACATGAAACCAATCATCCTCATCGATGCATAGCTTTGCTCCAAAAGATTTTTCACTCTGTGAAAACTCTAATGCCTCTTCGTCAACTAGCATATGAGATTCAAGACATTAAATCATCAGTTCATAATATCAAAGAAGGAAGTAAAAGCTATAACTTTCAGTCTGAAGATGGATCTAGCAGCGCTGGAAGGAACCAAAGTGGAAAATGGCATGATCCTCGATTAGTTTCTCTTTTCATAGAAGAATCTGAAGTTGTGGGATTCGAGAAACCAACTGAACAATTGGTTGGTTGGTTAATGAATGGAGCAACAGCTCGCACTGTAATTTCAGTGGTAGGTATGGGAGGACTTGGAAAGACCACTCTTGCTAAGAAAGTTTTTGACAGCCAGCAAGTGAAAGGACACTTCGATTGTTGTGCTTTCATCATTGTTTCTCAATCATATGCCATAGAATCCTTGTTGAAAAGCTTGTTGAACAAGTTCTGTGAAGAGACTAAGGAGCTTCTTCCTCAAGATATAAAGACGATGGACAAGATGTCACTCATTACTGCAGCAAGGCATTACTTGCAAAACAAGAGGTATGTAATCTTCTTTGATGATGTGTGGAAATTAGATTTTTGGGATGAGATCCAACTTGCCACACTCAATAACAACAAGGGCAGTAGGATAGTGATCACAACTAGAAACTTGGATGTTGCCAACTACTGCAAGAAAGATTCCCATGTTCAAGTGCATAAGTTGCAACCCTTGTCTCCAAACAAAGCATGGGAACTATTTTGCAAGAAGGCATTTCAAACTGATTTTAGTGGAAATTGTCCTTTGGAGCTCAAAGATATGTCTAATGAAATTGTTAAAAAATGTGAGGGGCTACCACTTGCAATTGTAGCCATTGGAGGTCTTATGTCAACCAAAGACAAAACTGTATTTGAATGGAGCAAAATCTGCCAAAACCTTAGTGTTGAACTTGAGAGAAATCCACATTTAACTAGTTTGACTAGAATTTTGTGCCTCAGTTATGATGACTTGCCTTACTATTTGAAATCATGTATCTTGTATTTTGGGATATATCCAGAGGACTATTCCATTAGGTGCACGAGGTTAGTTAGGCAATGGATAGCTGAAGGGTTTGTTATAAACCAAGAGGTAAAACCTTTGGAGGAAGTTGCACGAGAGTACTTGTTAGAGTTGATCCACAGAAGCTTGGTCCAAGTCTCAAAAGTTGACTATGATGGGAAAGCTCTAAGCTGTAGAATCCATGATTTGCTACGTGAAATTATCATTAGAAAAATGAAGGACTTAAGTTTTTGCCGTGTTGTTTATGAAGGTGATCAACAAAGCTTTGATGCAACAGCTCGACGCTTGGCCGTTGCAACTACTTCCAATGATGCCTTAAGAAGCATTACACAACATACTTCCATCCGGTCCATGTTCATGTTTGAAGCAAGTGAACTGCCAGATCACTTTATGAAGAGTTTCTTTTCAAAATCTAAGCTTGTCAAAGTATTGGATTTTGAAGGCACTTCATTGAATTATGTTCCCTATGACTTGGGGAGTATTTTTCACTTGAGGTACTTGAGCTTAAGGAAAACTAATGTTAAGGACATTCCAAAATCTATTGGTAAACTGCACAACCTAGAAACCTTGGATCTAAAGGAAACACTAGTGCGTGACTTGCCAAGTGAGATAAACAAGCTTACAAAGTTACGCCATCTTTTAGTTTACCACAGAGATACCAGTTATAGTATTAATGGTGAAACTGGAGTGAGGCTGAAGGAAAATATTGGAAACTTGACATTTCTTCAAAAGCTTTATCATGTAGAGGCAGACCATGGTGGATTCAACCTAATAACAGAGCTAAGAAAGTTGAGGCAGTTAAGGAAATTGGGCTTAAAGAATGTGAAGATGGAATATGGGAACATTTTGTGTGACTCAATCCAAGAAATGAATTGCCTTGAAACTCTTTATATTTGTTCAATAACTGAAGATGAGACCATTGATTTGCAATTTATCTCATCTCTCCCTCAACTCCGACGACTTCACTTGTTTGGTCGCTTAGAGAAGTTTCCTAATTGCATTCCAAGACTTGAGTATCTTGTTAGGTTGTCCATTCGCTTTTCCAAGTTGAAGGATGATCCACTGAAGTCACTTAAAGATCTGCCGAATTTGATGCGTCTCTCGATTTCAGGCGAAGCATATGTTGGTGAAAAGTTGCATTTTGAAGTGGGATTTCAGAAATTGAAGAGACTTTTTCTTATGAATCTGAGTAAACTGAGTTTCATTGTTCTAGACAATGGAACTTTGCCAGCTCTTGAAAGAGTTAATATGATGGGCTTGCCCCAACTGAAGGAGTTGCCCCCTGGCTTCCACTTGCTTCAAAACCTTGAAAATATGTATTTAACTGATATGTCAAATGAATTCAACAAAAGCATTGATCCGAATGATGGACCCATGTACTGGGTCATCCAGCACGTTCAAATGGTATCAATTAGAGAGAAGGTTGGTCCAAACTACAGGTATCGCACTATTTGCCATCCAAAAGAGGTCTAA 2808 0.3839 MAEIVVSFALEQVVQLLHEEATLIGGVHKEFVEIKNELQIIQNFLKDADRRASDEENLENGIKIWVKKLRELSFRIEDVIAEYNIYVAHETNHPHRCIALLQKIFHSVKTLMPLRQLAYEIQDIKSSVHNIKEGSKSYNFQSEDGSSSAGRNQSGKWHDPRLVSLFIEESEVVGFEKPTEQLVGWLMNGATARTVISVVGMGGLGKTTLAKKVFDSQQVKGHFDCCAFIIVSQSYAIESLLKSLLNKFCEETKELLPQDIKTMDKMSLITAARHYLQNKRYVIFFDDVWKLDFWDEIQLATLNNNKGSRIVITTRNLDVANYCKKDSHVQVHKLQPLSPNKAWELFCKKAFQTDFSGNCPLELKDMSNEIVKKCEGLPLAIVAIGGLMSTKDKTVFEWSKICQNLSVELERNPHLTSLTRILCLSYDDLPYYLKSCILYFGIYPEDYSIRCTRLVRQWIAEGFVINQEVKPLEEVAREYLLELIHRSLVQVSKVDYDGKALSCRIHDLLREIIIRKMKDLSFCRVVYEGDQQSFDATARRLAVATTSNDALRSITQHTSIRSMFMFEASELPDHFMKSFFSKSKLVKVLDFEGTSLNYVPYDLGSIFHLRYLSLRKTNVKDIPKSIGKLHNLETLDLKETLVRDLPSEINKLTKLRHLLVYHRDTSYSINGETGVRLKENIGNLTFLQKLYHVEADHGGFNLITELRKLRQLRKLGLKNVKMEYGNILCDSIQEMNCLETLYICSITEDETIDLQFISSLPQLRRLHLFGRLEKFPNCIPRLEYLVRLSIRFSKLKDDPLKSLKDLPNLMRLSISGEAYVGEKLHFEVGFQKLKRLFLMNLSKLSFIVLDNGTLPALERVNMMGLPQLKELPPGFHLLQNLENMYLTDMSNEFNKSIDPNDGPMYWVIQHVQMVSIREKVGPNYRYRTICHPKEV* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0923 935 Gene3D - 337 426 IPR042197 -
Apr2g0923 935 PRINTS Disease resistance protein signature 195 210 - -
Apr2g0923 935 PRINTS Disease resistance protein signature 275 289 - -
Apr2g0923 935 PRINTS Disease resistance protein signature 374 388 - -
Apr2g0923 935 PRINTS Disease resistance protein signature 627 643 - -
Apr2g0923 935 CDD RX-CC_like 2 133 IPR038005 -
Apr2g0923 935 Gene3D - 427 517 IPR036388 -
Apr2g0923 935 Gene3D - 5 118 - -
Apr2g0923 935 PANTHER DISEASE RESISTANCE PROTEIN RP 31 893 IPR044974 GO:0006952
Apr2g0923 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 440 IPR027417 -
Apr2g0923 935 Pfam Rx N-terminal domain 5 95 IPR041118 -
Apr2g0923 935 Gene3D Ribonuclease Inhibitor 544 905 IPR032675 -
Apr2g0923 935 SUPERFAMILY L domain-like 545 893 - -
Apr2g0923 935 PANTHER - 31 893 - -
Apr2g0923 935 Gene3D - 160 331 IPR027417 -
Apr2g0923 935 Pfam NB-ARC domain 176 428 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0923 Apr-Chr2 14978051 14986090 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0923 196 385 WRKY Transcription Factor Family AT5G45050 28.125 1.13e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0923 K13457 - gmx:100801561 999.579