Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0913 ATGGCATCGAGTTCAATGTCATCCACTGGCTCATGGAGTGCTAAGGACAATAAAGCCTTTGAAAGGGCTTTAGCTGTTTATGACAAGGACACCCCTGACCGTTGGCACAATGTTGCTAAGGCTGTTGGAGGGAAGACTCCAGAGGAAGTGAAGAGGCACTATGAGCTCCTACTCAGGGATGTTAGGCACATTGAATCAGGTCAAGTTCCATTCCCAAATTACAAGCAAAGTGGAGGGTCTGAAGAGGAGAAAAGGCTGAGAAACATGAAGCTCCAGTGA 279 0.4731 MASSSMSSTGSWSAKDNKAFERALAVYDKDTPDRWHNVAKAVGGKTPEEVKRHYELLLRDVRHIESGQVPFPNYKQSGGSEEEKRLRNMKLQ* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0913 92 SMART sant 8 60 IPR001005 -
Apr2g0913 92 CDD SANT 18 58 IPR001005 -
Apr2g0913 92 Gene3D - 2 71 - -
Apr2g0913 92 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Apr2g0913 92 MobiDBLite consensus disorder prediction 68 92 - -
Apr2g0913 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Apr2g0913 92 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 92 - -
Apr2g0913 92 Pfam Myb-like DNA-binding domain 9 55 IPR001005 -
Apr2g0913 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 92 IPR044636 GO:0003700
Apr2g0913 92 MobiDBLite consensus disorder prediction 78 92 - -
Apr2g0913 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0913 Apr-Chr2 14623229 14624132 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr2g0913 Myb_DNA-binding 8.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0913 - - gmx:100804396 171.014