Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0902 ATGCCGGATGTTCAAGCCCTTGTTAATGATTTTGTGAATCAGCTTAAGAAACGTAAAATTGAAGGTTCTCAGGCCACAGCAAAGCAAGCAGCAGAGTTGCTCCGGGCTGTGATTTCGCAGCAGCGGGTGCCACACACAAACCAGGCCACAGCTCTGATTAATGCTGTAAGGGCTGTGGGGGAGCAGCTTATTGCTGCTAATCCTATTGAGTTAGCTGTTGGAAATATTGTGAGGCGTGTTTTGCACATTATAAGGGAGGAGGATCTTTCCCTTGCAACAGCTGCTATGGCTGGTTTGGGAATATCTGCTGCAAGTGATGATGAAGATGATGTGGAGCGAGATGATCATCCTGTTTTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCCCCGTCATTGCAAACTCTTCTAGAGGATACGTCTGAGTCAACCGCTGTTCCACACACATCTTCCTCAGGGGGTGAATCTGAAGGGAAAAGTAGATCTGTTGAAAAGGGTTCAAGAGGTAAGAAGCTGAAGCATGATGTAATTGAAGCAGTCAATGAACTTATTCAAGACATATCCACTTGCTATGAACAAATAGCAGAGCAGGCAGTAGAGCACATTCATCAAAATGAGGTAATATTAACACTAGGCAGCTCAAAAACAGTGTTGGAATTTCTTTATGCTGCAAAGGAGAAAAAGAGATCGTTTAAGGTCTTTGTTGCTGAGGGTGCCCCAAGATATCAGGGCCATCTCCTTGCAAAAGAATTGGCTGCCCGAGGCTTACAGACCACAGTAATTACTGATTCTGCAGTTTTTGCTATGATATCCCGAGTGAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTTATTGCCCCGGTAGGGTTACATATGGTTGCACTTGCAGCTCAAAAGCATGCCGTTCCTTTTGTTGTACTTGCTGGGAGTCACAAGTTGTGCCCTTTGTATCCACACAATCCTGAAGTCCTACTGAATGAGCTGAGATCCCCATCGGAGCTACTTGACTTTGGGGAATTCTCAGATTGCATGGATTATGCAAGTGGTGCTGGTTCTCTCCATGTCATTAATCCAACATTTGATTATGTACCACCGAACCTTGTTAGTCTCTTTATTACTGACACCGGGGGGCATAACCCATCATATATGTACCGGCTTATAGCTGATTATTACTCTGCTGATGATTTGGTGGTGAAACAAAGACCTACTTCAGGGAGTTGA 1248 0.4511 MPDVQALVNDFVNQLKKRKIEGSQATAKQAAELLRAVISQQRVPHTNQATALINAVRAVGEQLIAANPIELAVGNIVRRVLHIIREEDLSLATAAMAGLGISAASDDEDDVERDDHPVLSAAAVAAAARSTLRPPSLQTLLEDTSESTAVPHTSSSGGESEGKSRSVEKGSRGKKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHQNEVILTLGSSKTVLEFLYAAKEKKRSFKVFVAEGAPRYQGHLLAKELAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLHMVALAAQKHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDYASGAGSLHVINPTFDYVPPNLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKQRPTSGS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0902 415 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237
Apr2g0902 415 Gene3D - 194 399 IPR042529 -
Apr2g0902 415 MobiDBLite consensus disorder prediction 141 161 - -
Apr2g0902 415 PANTHER BNAA01G32370D PROTEIN 55 407 - -
Apr2g0902 415 PANTHER BNAA01G32370D PROTEIN 8 54 - -
Apr2g0902 415 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 404 IPR037171 -
Apr2g0902 415 MobiDBLite consensus disorder prediction 141 173 - -
Apr2g0902 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 55 407 - -
Apr2g0902 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 8 54 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0902 1 407 Eukaryotic Initiation Factors Gene Family AT3G07300 81.663 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0902 K03754 - gmx:100778545 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0902 2 14235566 14240856 Apr2g0902 2 14235566 14240856 ECH