Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0873 ATGAGCATGTTAGGCCTTAGAGACCTTGTTCTCATAGCTCCAACCCCTTCCCTTCACCAAGGCCAACCCATTTCAGCAGAACACACTTCAAACCTTCCTCTCCCTTCATCAGCTTCTCTAAGTGTTGGTTTTGGCATTTTCCCACTCCTAACTGCCACACCTTGCATGCCACAACCTCATCAAAACAATGAAGTTCAAGATTGCGGTGGCAGCAACAACAACAACAACAACTATTGGAACCTCAAGATGTGCCCTGAAGTGAACCCTTCAAAGAAGGGAGTGATCAACGTGGATGATGATGATGAGAACCACCACAAGGTTGTGATGGAGAATGAGGAAAATGGAGTGTATGGTGCTGACTTTAGAGTGTGTCAAGATTGTGGCAACAGGGCTAAGAAAGATTGCATCTTTAGGAGGTGTAGGACTTGTTGCAAGGGACGTGGATATGATTGCAACACTCACGTGAAGAGCACGTGGGTCCCCTCAATTCGCCGCCGAGAGCGGGAGATGGCGGTGGCTGCCGGTGGTGCTGGTGCTAAGAGGCCAAGAGCTATAGTAGGGTCATCACAAAATGCCACTGCCACATCTCATAGTTCCAACTCTAATGCTACCACCCCTAAGAGCTTAGCTACTAGCTCTCCTCACCAAGATGCGGGGTTCAAGCAGTCTTTACCAGGTCATGTTCGTGCACCTGCTGTGTTCAGGTGCCATAGAGTCTCTGCCATTGGAAATGGTGAAGATGAATTTGCATACTTGGCCACTGTTCATATTAGTGGCCATGTGTTCAAGGGGTTTCTCTATGATCATGGTGTTGATGGCAAAAATTCAAATGCAGTGCCTTGTGTTTCAGAACTGCAATTGGGCAACAATTGCAGTGGCAAGAACAGGGAATGTTCTTCAATTGGGGTTCCAACCAACAATGCCTACCCTGCCTCTGCTAGTTGA 945 0.4783 MSMLGLRDLVLIAPTPSLHQGQPISAEHTSNLPLPSSASLSVGFGIFPLLTATPCMPQPHQNNEVQDCGGSNNNNNNYWNLKMCPEVNPSKKGVINVDDDDENHHKVVMENEENGVYGADFRVCQDCGNRAKKDCIFRRCRTCCKGRGYDCNTHVKSTWVPSIRRREREMAVAAGGAGAKRPRAIVGSSQNATATSHSSNSNATTPKSLATSSPHQDAGFKQSLPGHVRAPAVFRCHRVSAIGNGEDEFAYLATVHISGHVFKGFLYDHGVDGKNSNAVPCVSELQLGNNCSGKNRECSSIGVPTNNAYPASAS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0873 314 MobiDBLite consensus disorder prediction 174 222 - -
Apr2g0873 314 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 2 313 - -
Apr2g0873 314 Pfam Domain of unknown function (DUF702) 123 272 - -
Apr2g0873 314 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 224 271 IPR006511 -
Apr2g0873 314 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 313 IPR007818 GO:0003700|GO:0006355
Apr2g0873 314 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 123 165 IPR006510 -
Apr2g0873 314 MobiDBLite consensus disorder prediction 186 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0873 Apr-Chr2 13541779 13543189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0873 1 295 C2H2 Transcription Factor Family AT5G12330 41.613 6.18e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Apr2g0873 DUF702 1.8e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0873 - - vun:114175485 502.286