Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0865 ATGGACACCAAACTCCTAACAATCGGAACGCTAGTAAGCAGCCTCAATTCTCCCTCTGACCAAACCCGCCTCGCCGCACTCCGCCACCTCCGCCTCAATTCAAACCAAGACCCCGCCACCCGCCCCCTCATCGCCGCTGCAGGGGCCGTCCCCCTCCTGGCCGCCGCCCTCTACTCCCCCTCTCACCCCATCCAAGAACACGCCGCCGCCACACTCCTCAACCTCTCCATCTCCGACCGCAACCCCCTCGTCTCCTGCTCCACCCTCCTCCACGCCCTCTCCCACCTCCTCTCCCGCCACAGCTCCTCCTCCTCCGCCTCTGCCGTCCAGTCCTCCGCCGCCACTCTCCACAGCCTTCTCGTCGTCGTCCCCGAGTACCGCCTCATCGTCGGGGCCAATCACGACGTCCTTCGAGCCCTCCTCGGCGTGATGAGCTCTCTGGGCTCGCCGACGAGATCCCTGAAGGACGCCCTCAGAGCGTCCTTTGGCGTGGCGCTACACCCGCCGAACCGGACCGTTATGGTCCGGCTGGGCGTAGTTTCGGCGCTATTCGACCTCGTAAAGAGGGCGAAGAAAATTGGCATAATTGAGGATGTAACTGCGGTGATTGCGCAAATCGCGGGGTGCGAGGAGAGCGAAAAGGAGTTTGAGAAGGTTTTGGGGGTTTCTGTGTTGTTGGGGATGTTGGGTTCGGAAAGTGGGAATTGCAGTTTGAGGACAATGGAGAATGCAGTTTCGGGTTTGTTGAATTTGGTTCGGTTTGGGGGAGAGAAGGTTGTTGGCGAGGTTAGAGATAAGGTTGGGGCTTTGGATGGGATTGTGTACGTGCAAGAACATGGTAGCGCTAAAGGCAAGAGCAAAGCCGTGGCGTTGTTGAAGTTTTTGCTTGATGGTCGAAGCAATAATCAAATTGAAGACTTGTATCCCGTTCAGTTTGACTCCGGTTCAAGTTCCAGTGGGTAA 963 0.5805 MDTKLLTIGTLVSSLNSPSDQTRLAALRHLRLNSNQDPATRPLIAAAGAVPLLAAALYSPSHPIQEHAAATLLNLSISDRNPLVSCSTLLHALSHLLSRHSSSSSASAVQSSAATLHSLLVVVPEYRLIVGANHDVLRALLGVMSSLGSPTRSLKDALRASFGVALHPPNRTVMVRLGVVSALFDLVKRAKKIGIIEDVTAVIAQIAGCEESEKEFEKVLGVSVLLGMLGSESGNCSLRTMENAVSGLLNLVRFGGEKVVGEVRDKVGALDGIVYVQEHGSAKGKSKAVALLKFLLDGRSNNQIEDLYPVQFDSGSSSSG* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0865 320 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 48 81 IPR000225 GO:0005515
Apr2g0865 320 SMART arm_5 167 208 IPR000225 GO:0005515
Apr2g0865 320 SMART arm_5 37 77 IPR000225 GO:0005515
Apr2g0865 320 SMART arm_5 209 253 IPR000225 GO:0005515
Apr2g0865 320 Pfam Armadillo/beta-catenin-like repeat 40 76 IPR000225 GO:0005515
Apr2g0865 320 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 300 - -
Apr2g0865 320 PANTHER U BOX DOMAIN-CONTAINING 2 300 - -
Apr2g0865 320 SUPERFAMILY ARM repeat 7 305 IPR016024 -
Apr2g0865 320 Gene3D - 4 294 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0865 Apr-Chr2 13360013 13360975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0865 8 303 U-box Gene Family AT5G67340 32.226 2.87e-23 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0865 - - gmx:100803111 391.734