Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0864 ATGGAGGATAAAGCAGAGAACCAAGATGATAACCACCCATCTCTCCTCCCTAATCACAACACAACCACCACCATCACAACAAAAGAAGAGTCTCCAAGAAAACCCATTGGTGGTGGGAGTGATAGGCTTAAGAGGGATGAGTGGAGTGAAGGGGCTGTGTCAACACTTCTTGAGGCCTATGAGGCCAAATGGGTGCTTAGAAACAGAGCCAAACTCAAAGGGCATGATTGGGAAGACGTTGCAAGATATGTTTCATCAAGAGCAAACTCTACCAAATCACCAAAGACACAAACACAGTGTAAGAACAAGATTGAGTCAATGAAGAAAAGGTACAGATCAGAGTCAGCAACCACTGCAGATGCATCATCTTGGCCTTTGTATTCTCGTCTTGATGTTCTGCTTCGTGGGACAGGACCAATATCCACAACACTGCCACCACCACCACCACCACCAACAACAACAACAGCACCTTCTCAATCACCACACCCTACCAATAACCAATCTTTGATCTTGTTGGAGCCATCACAAGCACCCAATATTCCTGTTGCTCCTCCACCACTTGCAATTGCACAAAATTCACATGGATCCAATGGTGTTGAAAGATTCGCCAAGGAAGATGGGTTAGAAACTAAGTCATCTGATCATGTATCTAACAAGAATCCATTGGACTCGGATAGTAGCACTCCTGCACTTTACAGTGAAAAGGAAAAGGTAAGACACAACAAGAGGAAGATGAAGACAGAGAATAAGAGGAAAAGGAAAGAAGACATGGAAATAGCCGAAAGCATAAGGTGGCTAGCAGAAGTGGTTGTAAGGTCAGAACAAACAAGAATGGACACAATGAAAGAGATAGAGAGGATGAGAGTTGAAGCAGAGGCAAAGAGAGGAGAAATGGATCTTAAGAGAACTGAAATCATTGCTAATACTCAGCTAGAGATTGCTAGGATATTTGCAAGTGTCAATAAAGGTGTTGATTCCTCATTAAGAATTGGAAGAAGTTAA 1002 0.4291 MEDKAENQDDNHPSLLPNHNTTTTITTKEESPRKPIGGGSDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARYVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATTADASSWPLYSRLDVLLRGTGPISTTLPPPPPPPTTTTAPSQSPHPTNNQSLILLEPSQAPNIPVAPPPLAIAQNSHGSNGVERFAKEDGLETKSSDHVSNKNPLDSDSSTPALYSEKEKVRHNKRKMKTENKRKRKEDMEIAESIRWLAEVVVRSEQTRMDTMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNKGVDSSLRIGRS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0864 333 MobiDBLite consensus disorder prediction 137 167 - -
Apr2g0864 333 Pfam Myb/SANT-like DNA-binding domain 45 132 IPR044822 -
Apr2g0864 333 MobiDBLite consensus disorder prediction 11 30 - -
Apr2g0864 333 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 26 329 IPR044823 -
Apr2g0864 333 Gene3D - 48 113 - -
Apr2g0864 333 Coils Coil 235 255 - -
Apr2g0864 333 MobiDBLite consensus disorder prediction 1 48 - -
Apr2g0864 333 MobiDBLite consensus disorder prediction 206 253 - -
Apr2g0864 333 MobiDBLite consensus disorder prediction 34 48 - -
Apr2g0864 333 MobiDBLite consensus disorder prediction 141 157 - -
Apr2g0864 333 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 26 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0864 Apr-Chr2 13320419 13323341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0864 34 143 Trihelix Transcription Factor Family AT3G14180 38.053 1.25e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr2g0864 Myb_DNA-bind_4 2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0864 - - gmx:100799917 461.84