Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0856 ATGTGGAGTACAGCCACATTTTGTGTAGAAGATGAGAAGGGAAGCACAAGAGGAATGCCGAGCTTCAATTCGCAATTACCAAATTCCAATGCATGCTATAGAGAGGGAATCACAGTTGATTCTTTTCGTGTGTCTGACTTTGATCAATCAGTTGGATATTGCGTAGAGGATGCTGTTGACTTGAGTGGAAAAAGTAGCCAAACAATTTCACGTGGTCCTGTTCGCTTTGGTACCTTTGATAAGTTGCCAATTTCACATGATAAAAGCCCATTGACGAACCAAACAGTGCAACAGAGTTTGCAATTACAGAAGATTCAATTGTCAAATCTGGTCAGTGGTGATACTGAAGAACATCACGAAGAGTCTGCCATGGCTGATGCCAGTCCTAGAACTGATATTTCTACAGATGTTGATACTGATGATAAGAATCCTCGGTTTGATAGAAGTCAATCCCTTGCTATCGTGGTGTCTGACTCCAGTGACAGATCAAAAGATAAAACAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAATCGTGAGGCTGCAAGAAAAAGTCGGTTGAGAAAGAAAGCTTATGTTCAACAGCTGGAAAGTAGCCGTTTGAAATTAACCCAACTGGAGCAAGAGCTTCAGCGAGCCAGGCAGCAGGGAATCTTTATATCAAGCTCAGGTGATCAAGCACATTCAATGAGTGGAAATGGGGCCATAGCATTTGATGTAGAATATGCAAGGTGGTTGGAAGAGCAGAATCGACAAATTAATGAGCTAAGAGCAGCTGTAAATTCTCATGCCAGTGATACTGAACTTCGCATGATTATTGATGGTATATTGGCACATTATGATGAGATATTTAAGCTGAAGGGCATTGCAGCTAAGGCTGATGTCTTCCATTTGTTGTCTGGCATGTGGAAAACACCAGCTGAAAGGTGTTTTCTGTGGCTTGGAGGTTTTCGGTCGTCTGAACTCCTCAAGCTCTTGGTAAGTCAGTTGGAACCTCTAACAGAGCAGCAGCTAGTGGGTATTACCAACTTGCAGCAATCTTCCCAACAGGCAGAAGATGCATTGTCTCAGGGGATGGAAGCATTGCAACAGTCCCTTTCTGAGACATTGTGCACTGGATCACTTGGCTCCTCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGCAAACTAGGGACACTTGAGGGGTTCATTCGTCAGGCTGACAATTTGCGCCAGCAGACACTGCAACAAATTCACCGAATATTGACTACTCGGCAATCAGCTCGTGCACTCCTTGCAATACACGACTACTTTTCTAGGCTGCGTGCCCTAAGCACCCTTTGGCTTGCCCGCCCAAGAGATTGA 1368 0.4466 MWSTATFCVEDEKGSTRGMPSFNSQLPNSNACYREGITVDSFRVSDFDQSVGYCVEDAVDLSGKSSQTISRGPVRFGTFDKLPISHDKSPLTNQTVQQSLQLQKIQLSNLVSGDTEEHHEESAMADASPRTDISTDVDTDDKNPRFDRSQSLAIVVSDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMSGNGAIAFDVEYARWLEEQNRQINELRAAVNSHASDTELRMIIDGILAHYDEIFKLKGIAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLSETLCTGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQIHRILTTRQSARALLAIHDYFSRLRALSTLWLARPRD* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0856 455 Coils Coil 246 266 - -
Apr2g0856 455 MobiDBLite consensus disorder prediction 133 147 - -
Apr2g0856 455 MobiDBLite consensus disorder prediction 112 172 - -
Apr2g0856 455 Coils Coil 189 216 - -
Apr2g0856 455 PANTHER TRANSCRIPTION FACTOR TGA9 52 455 - -
Apr2g0856 455 CDD bZIP_HBP1b-like 170 222 - -
Apr2g0856 455 Pfam bZIP transcription factor 170 210 IPR004827 GO:0003700|GO:0006355
Apr2g0856 455 ProSiteProfiles DOG1 domain profile. 235 452 IPR025422 GO:0006351|GO:0043565
Apr2g0856 455 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 173 188 IPR004827 GO:0003700|GO:0006355
Apr2g0856 455 Pfam Seed dormancy control 252 328 IPR025422 GO:0006351|GO:0043565
Apr2g0856 455 SMART brlzneu 166 229 IPR004827 GO:0003700|GO:0006355
Apr2g0856 455 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 168 212 IPR004827 GO:0003700|GO:0006355
Apr2g0856 455 Gene3D - 169 221 - -
Apr2g0856 455 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 52 455 - -
Apr2g0856 455 SUPERFAMILY Leucine zipper domain 170 213 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0856 Apr-Chr2 12998731 13014856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0856 124 455 bZIP Transcription Factor Family AT3G12250 77.711 0.0 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr2g0856 DOG1 5.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0856 K14431 - gmx:100816123 702.975