Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0855 ATGGCTTTCAACGCTAAGCAAAAGGGTAAAGAAGAAGAAGAACCTTACAAAATGGAAGAAGAAGAAGAAGAAGACGATGATGAAGAAGAACAAGTGTGGGACGATTGGGAAGGAGACGAGGGAGACCCACAATTAGAATTTCTCTGTCTGTTCTGTGATTCCCACTACGGTTCGTGCGGTTCCTTGTTCGACCATTGTGCTTCCCTTCACCACTTCGATTTCCATGCCATTAGAAAAGCCCTTAACTTGGATTTCTATGCCTCCTTCAAGATCATTAACTTTATTCGCTCTCAGGTGGCCGAGAGAAGATGTTGGAGCTGTGGATTAACATGTCAGTCCAACAATGACTTGCAGAATCATTTGCATGATGTGACCAACTTTAATGATATAAAGAAGGCTCTGTGGGATGATGATAGATATCTAAAACCTTTCATGCAAGATGATTCTCTATTGTACAGTTTTGGTGAATGCGGCGAAGAAGGTGAAGATGAGCAAATTACTCCGATGGATGAAGATCTTTTGAGGGATTTGATGATAACTGAAGAGACATTCCGTGACGATCAAAGTGTTGCAATAAAAGTGGGGGTTAATGGTGGTGAATATGATGCTTGTAGAAGAATGGAAACTGCTTCTGCTTCTAATGATTGTTTGAACTGGGCTAGTCCTTCAAACAAGGAACTTAGTAATGGTAAGGATTCAAGCGGAAATGTTTCATGCAGTGATAGGGATCCAGAAGAAGGTTATTCAATGGCTTATTCTCAAAATCACATTGCAAAGCATATTATGAAGGTTAATGAAAATTATTTTGGGTCTTACAGTTCATTTGGTATCCATCGAGAGATGTTAAGTGATAAGGCGAGAATGGATGCCTATGGGCAAGCAATTTTGAAGAATCCCTCTCTAATAAATGGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGAATCCTCAGCCTATTTGCAGCAAAAGCAGGGGCTTCAAGGGTTATTGCAGTTGAGGCTAGTGCAAAGATGGCAGCGGTGGCATCTCAGGTTGCAAAAGATAATGGTCTTTGGCTAAGTAAAGGCCAAAATGGAGTCAATGCCCTCCAGAAGGGAGTTGTAGAAGTGGTTCATGGTATGGTTGAAGAGATTGATAAAACAGCTGAGCTTCAACCTCACAGTGTTGATGTATTACTCAGTGAATGGATGGGATATTGCCTGTTGTATGAATCCATGCTTGGTTCAGTGCTTTTCGCACGGGAGCGGTGGTTGAAGCCTGGCGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGGTTTGGAAAAGGAGCTACAAGTCTTTCATTTTGGGAAAATGTGTGTGATTTTGACATGTCTTGCATTGGGAAAGAGCTTGTCATAGATGCTGCCCGAATTCCTATAGTTGATATTGTGGACTCTCAAGATTTAGTTACCAGTTCTGCGATTCTTCAGACCTTTGACTTGGCAACCATGAAGCCTAATGAAGTGGATTTTACTGCAACTGCTACCTTGCAATTGAAACCAACTGCTTCAGATAAAAATGAAATGCGTTTAAATTCTAAAACATGCTGCTGGTGTCATGGTGTTGTCCTATGGTTTGAAACTGGATTTACAAGCAGATTCTGTCGTGAAACGCCAGTTGTGTTATCCACATCACCTTACACACCAAGAACACATTGGTCACAAACAATTTTGACCTTTCGGGAACCAATTGCAATGGGATCTGGAAAAGAAAACGGGGGTAAACTGGAAGCAATTGGCACTGACGTGTATCCTGCTGTGAAGATTGATTTGCGTGTCAGCATTGTTCGTTCTACAGAGCATCGCAGCATCGACATTTCCTTAGAAGCTGCTGGTGTTGATCCTGATGGCCGGAGACGCAGTTGGCCTGCTCAGCCTTTTTCTCTTCATTAG 1923 0.4228 MAFNAKQKGKEEEEPYKMEEEEEEDDDEEEQVWDDWEGDEGDPQLEFLCLFCDSHYGSCGSLFDHCASLHHFDFHAIRKALNLDFYASFKIINFIRSQVAERRCWSCGLTCQSNNDLQNHLHDVTNFNDIKKALWDDDRYLKPFMQDDSLLYSFGECGEEGEDEQITPMDEDLLRDLMITEETFRDDQSVAIKVGVNGGEYDACRRMETASASNDCLNWASPSNKELSNGKDSSGNVSCSDRDPEEGYSMAYSQNHIAKHIMKVNENYFGSYSSFGIHREMLSDKARMDAYGQAILKNPSLINGAVVMDVGCGTGILSLFAAKAGASRVIAVEASAKMAAVASQVAKDNGLWLSKGQNGVNALQKGVVEVVHGMVEEIDKTAELQPHSVDVLLSEWMGYCLLYESMLGSVLFARERWLKPGGAILPDTATIFVAGFGKGATSLSFWENVCDFDMSCIGKELVIDAARIPIVDIVDSQDLVTSSAILQTFDLATMKPNEVDFTATATLQLKPTASDKNEMRLNSKTCCWCHGVVLWFETGFTSRFCRETPVVLSTSPYTPRTHWSQTILTFREPIAMGSGKENGGKLEAIGTDVYPAVKIDLRVSIVRSTEHRSIDISLEAAGVDPDGRRRSWPAQPFSLH* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0855 640 Pfam C2H2 type zinc-finger (2 copies) 49 123 IPR041661 -
Apr2g0855 640 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 271 584 IPR029063 -
Apr2g0855 640 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 22 638 IPR025799 GO:0016274|GO:0018216
Apr2g0855 640 MobiDBLite consensus disorder prediction 1 15 - -
Apr2g0855 640 Gene3D Vaccinia Virus protein VP39 256 426 IPR029063 -
Apr2g0855 640 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 265 597 IPR025799 GO:0016274|GO:0018216
Apr2g0855 640 MobiDBLite consensus disorder prediction 223 237 - -
Apr2g0855 640 MobiDBLite consensus disorder prediction 223 242 - -
Apr2g0855 640 MobiDBLite consensus disorder prediction 1 36 - -
Apr2g0855 640 SUPERFAMILY beta-beta-alpha zinc fingers 28 167 IPR036236 -
Apr2g0855 640 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 22 638 - -
Apr2g0855 640 CDD AdoMet_MTases 307 425 - -
Apr2g0855 640 Pfam Methyltransferase domain 307 422 IPR041698 -
Apr2g0855 640 Gene3D - 428 632 - -
Apr2g0855 640 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0855 Apr-Chr2 12969405 12979141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0855 21 639 C2H2 Transcription Factor Family AT3G12270 54.331 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0855 K11436 - gmx:100781879 945.266