Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0847 ATGGCGGAGTCTCGGCCCCCTAAGCGCCCCAAAATAACTAGGGGGGACGATGATTATGTGCCTGGAAATATTCTTGAGATCGAGCTTTGTAATTTCATGACATTTGATTACTTAAAATGCAAACCTGGCCCTCGATTGAATCTTGTAATTGGTCCCAATGGTTCTGGCAAGAGTTCGCTTGTATGTGCTATTGCTCTTGGCCTCTGTGGAGAGCCCCAGTTGCTTGGGCGTGCTACAAGTATTGAGGCATATGTCAAGCGGGGAGAAGAATCTGGCTACATTAAGATTACCTTGAGAGGGGACCGTAAAGAGGAACAAATTACCATTATGCGTAAAATTAATACTAACAACAAGTCTGAATGGTTGATCAATGGAAATGTAGTTCCCAGAAAGGATGTGGCTGAAACCCTTCAAAGGTTTAACATCCAAGTCAATAATTTGACTCAATTTTTACCGCAAGACAGGGTCTGTGAGTTTGCAAAATTAACTCCTGTGCAACTTCTGGAAGAGACTGAAAAGGCTGTTGGTGATCCACAGCTTCCAGCACAACATCGTGCACTAGTTGATAAAAGTCGTTCATTGAAGCATATTGCGTTGTCTCTAGAGAAAAATGAAGGAACTTTAAAACAGTTGAAGGAACAAAATGCTGAATTAGAGAAGGATGTTGAACGTGTTCGACAAAGAGATGAACTTCTTGCCAAGGCTGAATCAATGAGAAAGAAATTGCCATGGCTGAAGTATGATATGAAGCAGGCAGAATATCGGGAAGCTAAGGAGCGTGAGAATGATGCAGCAAAGGCATTGGAGGAAGCTGCACAGTTATTAAATGATCTTAAAGAACCCATTCAGAGACAAAAAGAGGAGAAGGGTGCATTAGATGCAAAATGTAAAAAGCTAAGCAACCGTGTAAATGAGAATGCCAAGAAGAGAATGGAACTTATGGAGAAGGAGAACCAATTGGATGTGGAATTGCGAGGGAAGTACAAAGATATGGAAGAGTTGAGGAGGCAGGAAGAAACTCGACAGCAAAGACTTATAAAAGCTAGGGAGGAACTTGCTGCTGCTGAACTTGACCTTCAAAACTTACCCCCTTATGTACATCCTAGGGATGAGCTTCAAAGACTAAAAGCTGAAATTGTGGAATTGGATTCTTCTGCTAATCAATTGAGGCAGAGTAAGTCACAAGCAGAAAATGAAATAAAGCGTAAGAAGTCATCCATGATGCAGTGTAAAGAGAGGTTAATGGAAATGAATAATAAAAGTACAAAGTGTTTGCACGTTTTGCAAAGATCAGGAGTTGAAAAAATTTTTGAAGCTTATAAATGGGTCCAAGAACATCGTCATGAATTCAATAAGGAAGTTTATGGTCCAGTTTTAGTTGAGGTGAATGTCTCAAATAGGGTTCATGCTGCATATCTAGAGGGTCAAGTTGCTCATTATGCTTGGAAGTCCTTCATAACACAAGATTCTGGGGATCGGGACCTTTTGGTTAAACAACTGCGGTTCTTTGATGTGCCAGTTTTAAATTATACAGGCAAAGATGGTCATCAAAGAGAGCCTTTTGAAATTTCTGAAGATATGCATGCTCTTGGTATCTACTCCCGGCTGGATCAAATTTTTGATGCTCCTTTTGCTGTCAAGGAGGTTTTGATCAGCCAGTTTAATCTAGACCATTCATATATTGGATCGAAAGAAACTGATCAGAATGCTGATAAGGTCCCAAAATTGGGAATTATAGATTTATGGACACCAGAAAATCATTACCACTGGTCCAAGTCTAGATATGGGAATCATGTCTCAGCAGTTGTTCAACAAGTGGAACGTCCACAACTTTTATTGAATAATTTGAATGTTGGTGAAATTGAGAAGCTGAGTTCACAGCAAAGGGAGCTTGAACAAGTCATTGCTAACTTGGAGCAAAGTGTTCAAAGGTTTCAAGATGAGGAAAGAAACTTGGTGAATCAAGCTGCTAATCTTCGTAAACAGTGGGAGGCAATTAGTATTACAGCACAGAATGAGCATAAAAAACGTCAAGCAATCATTAGCCGCATTGATCAAAGGAAAGGTATATTAAAATCAATGGAGGAACGGGATGATATAGATACTGAGATAGCAAAGCTTGTTGATCAGGCTACAAAATCTAATATTCAGCGATTTCATAATGCAATGAAAATTAAGGATCTTCTTGTCGAAGCTGTGAGTTATAGACAGAGTTTTGTTGAACAACGTATGGCTTTCATTGAATTCGAGGCCAAGATTGGAGAAATGCAGGCCAATCTGAAGCAACATGAGAATTTTGCTCTGCAAGCATCATTGCACTTTGATAACTGTAAGAAAGAGTCTGAGAATTGTAGACACAAGCTTACAGATTCCTTGAAGTTTGCAAAATCAATTGTTCGGTTGACACCTGAGCTAGAGAAGGAATTTCTTGAGATGCCCACAACAATTGAGGAATTGGAAGCAGCCATCCAAGATACCACTTCTCAAGCAAATTCAATTCTTTTTGTCAATCATAACATATTGGAACAATATGAAGATCGTCAACGACAGATTGAAGATCTTGCAGCAAAACTTAAAGCAGACAAGCGGGAATCTGCACAATGTCTTACTGAATTAAATAACATTAAGGGAAAATGGCTTCCAACATTGAGAAACCTTGTGGCACAAATAAATGAAACTTTCAGTTGTAATTTTCAAGAGATGGCTGTTGCTGGAGAAGTTTCACTAGATGAGCATGATATGGACTTCGATCAATTTGGAATACTTATAAAAGTTAAATTCAGAGAAAATGGACAGCTTCAAGTCCTGAGTGCCCATCATCAATCTGGAGGGGAGCGATCAGTTTCAACTATCGTCTATCTTGTTTCCCTTCAAGATCTTACAAACTGCCCATTTAGGGTTGTCGATGAGATCAACCAAGGGATGGACCCAATAAATGAAAGGAAGATGTTCCAGCAACTAGTGAGAGCAGCAAGCAAGCCAAATACACCACAGTGTTTCTTGCTTACCCCAAAATTGTTACCAGATCTGCAATATAGTGAGGCATGCAGTATATTGAATGTGATGAATGGACCTTGGATTGAGCAATCCTCAAAGGGTGATCGATGGAGTATTATCACGGGACTTGGGGAGACGCAATGTTGA 3144 0.3979 MAESRPPKRPKITRGDDDYVPGNILEIELCNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRATSIEAYVKRGEESGYIKITLRGDRKEEQITIMRKINTNNKSEWLINGNVVPRKDVAETLQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPAQHRALVDKSRSLKHIALSLEKNEGTLKQLKEQNAELEKDVERVRQRDELLAKAESMRKKLPWLKYDMKQAEYREAKERENDAAKALEEAAQLLNDLKEPIQRQKEEKGALDAKCKKLSNRVNENAKKRMELMEKENQLDVELRGKYKDMEELRRQEETRQQRLIKAREELAAAELDLQNLPPYVHPRDELQRLKAEIVELDSSANQLRQSKSQAENEIKRKKSSMMQCKERLMEMNNKSTKCLHVLQRSGVEKIFEAYKWVQEHRHEFNKEVYGPVLVEVNVSNRVHAAYLEGQVAHYAWKSFITQDSGDRDLLVKQLRFFDVPVLNYTGKDGHQREPFEISEDMHALGIYSRLDQIFDAPFAVKEVLISQFNLDHSYIGSKETDQNADKVPKLGIIDLWTPENHYHWSKSRYGNHVSAVVQQVERPQLLLNNLNVGEIEKLSSQQRELEQVIANLEQSVQRFQDEERNLVNQAANLRKQWEAISITAQNEHKKRQAIISRIDQRKGILKSMEERDDIDTEIAKLVDQATKSNIQRFHNAMKIKDLLVEAVSYRQSFVEQRMAFIEFEAKIGEMQANLKQHENFALQASLHFDNCKKESENCRHKLTDSLKFAKSIVRLTPELEKEFLEMPTTIEELEAAIQDTTSQANSILFVNHNILEQYEDRQRQIEDLAAKLKADKRESAQCLTELNNIKGKWLPTLRNLVAQINETFSCNFQEMAVAGEVSLDEHDMDFDQFGILIKVKFRENGQLQVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQSSKGDRWSIITGLGETQC* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0847 1047 Coils Coil 837 864 - -
Apr2g0847 1047 Coils Coil 331 351 - -
Apr2g0847 1047 Coils Coil 372 420 - -
Apr2g0847 1047 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 18 1041 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Apr2g0847 1047 CDD ABC_SMC5_euk 925 1027 - -
Apr2g0847 1047 Gene3D - 842 1023 IPR027417 -
Apr2g0847 1047 Coils Coil 201 235 - -
Apr2g0847 1047 Pfam RecF/RecN/SMC N terminal domain 25 993 IPR003395 -
Apr2g0847 1047 Coils Coil 621 662 - -
Apr2g0847 1047 CDD ABC_SMC5_euk 22 179 - -
Apr2g0847 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 995 IPR027417 -
Apr2g0847 1047 Gene3D - 23 231 IPR027417 -
Apr2g0847 1047 Coils Coil 251 317 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0847 1 1037 Structural Maintenance of Chromosomes family AT5G15920 62.344 0.0 1305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0847 K22803 - gmx:100778678 1810.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0847 2 12615616 12648116 Apr2g0847 2 12615616 12648116 ECH