Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0845 ATGATGCTTCTGGTGCCACCAAGGGCCAGGAGTACCAGAACATGCACGCACACTCACACATGCAACCCACCTGGCCCTGATGCTGCTCATATTCACACATGCTGTCACACACACACCCAAGTTTTTTCACCTGAAGATGATGAAAGGGATCACATTAACTCCAAGCCAAAAGGGCCTTCTGGCAACCGAGAAGCTGTTAGGAAGTATAGGGAGAAGAAGAAGGCACACACAGCTTACTTGGAGGAGGAAGTTAAGAAATTGCGTCTGGTGAATCAGCAACTAGTGAGAAAGCTACAAGGGCATGCACTGCTTGAAGCAGAGTTGTCAAAGTTGAGGAGCATTTTGGCACACCTTAAGGAAAAAATTGACACTGAAGTGGGTGCCTTCCCCTTTCGAAAGCACTCTGACTCTTCTTACATTTTCAAAGAAGGGGATACTGGTTTGTTGTCCTCTGCATGGACAATTGGTCATCAGTGTAAGAACAATTCGCCATGCTTCCATCCACATGCAGGATCATTATCATCCCAGCTTAACATTTGTGCATATGAAAAATCTATGATTCCATGGGAAGGACACTGCCAAGCTGAAATTTTAGATTGTCATGTTGATGCAAACAACATGACAAGTACTGAAGGACAAACTGTGGAAACAGTCGATAACTTCATGCCATCTGCATCTCAAGATGGATAG 690 0.4478 MMLLVPPRARSTRTCTHTHTCNPPGPDAAHIHTCCHTHTQVFSPEDDERDHINSKPKGPSGNREAVRKYREKKKAHTAYLEEEVKKLRLVNQQLVRKLQGHALLEAELSKLRSILAHLKEKIDTEVGAFPFRKHSDSSYIFKEGDTGLLSSAWTIGHQCKNNSPCFHPHAGSLSSQLNICAYEKSMIPWEGHCQAEILDCHVDANNMTSTEGQTVETVDNFMPSASQDG* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0845 229 Gene3D - 53 120 - -
Apr2g0845 229 SMART brlzneu 44 117 IPR004827 GO:0003700|GO:0006355
Apr2g0845 229 MobiDBLite consensus disorder prediction 43 66 - -
Apr2g0845 229 CDD bZIP 62 109 - -
Apr2g0845 229 Pfam Basic region leucine zipper 61 107 IPR004827 GO:0003700|GO:0006355
Apr2g0845 229 PANTHER BASIC LEUCINE ZIPPER 23 11 205 - -
Apr2g0845 229 SUPERFAMILY Leucine zipper domain 62 100 IPR046347 GO:0003700|GO:0006355
Apr2g0845 229 Coils Coil 101 121 - -
Apr2g0845 229 PANTHER CCAAT/ENHANCER BINDING PROTEIN 11 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0845 Apr-Chr2 12586388 12588107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0845 10 151 bZIP Transcription Factor Family AT3G51960 51.370 5.15e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr2g0845 bZIP_2 2.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0845 K25785 - gmx:100527780 315.849