Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0833 ATGGCTGAGCTGGTTGGGGGAGCATTTCTCTCAGCGTGCCTTCAAGTGACTTTTGATAGGTTGGCTTCAAGTGACATAAAAGACTACTTCCGAGGAAGGAAACTTAAGAATGAGCTACTCAAGAAGCTAGAGATTGCACTTAATTCTATAAACCAAGTTCTGGAGGATGCAGAGGAAAGGCAATACAAAAACCCAAATGTGATGAAGTGGCTTGATGAGCTTAAAGAAGTTGTATATGAAGCAGAGCAGCTTTTAGATGAGGTTGCTACAGAAGCATCACGACAGAAGCTCGAAGCTGAATTTCAACCTTCTAATAGCAAGGTACTAGGCTTCTTTACAACTATTATTAATCCATTTGACAAAGAAATTGCATCAAGGGTCAAAGAAATGCTTGAGAACCTAAATTTTCTTGTAGAGCAAAAGGATATATTAGGACTGAAAAAAGGAACTTGTGCTGGCAATGAAGATGGAGTCAGTTGGAAACTCTCCAACAGGTTGCCAACTACATCTTTGGTGGATGAATCTGGCATATGTGGTAGAGATGATGATAAAGAGGAAATAGTCAAAATTTTACTTTCTGATAGTGTCACGTGCAATCGGATACCAATAATTACCATAGTGGGTATGGGAGGGATAGGTAAGACCACCCTTGCTCAACTTGTGTATAATGACCAAAGAATAGATAATCAATTTGACCTTAAAGCTTGGGTCTATGTTTCACATGATTTTGATGTTGTTTTTGTCACAAAAGCAATTCTTAAGGCACTTCATTCCTTATTAGAAGAAGAGAAAGACTTGAATCTGCTCCAGCTTCAACTGAAGCAAAGACTGATGGGGAAGAAATTTTTTCTTGTTTTAGATGATGTCTGGAACGAAAACTATTTAATCTGGGAGGTATTAAAAGCCCCCTTCATTTATGGAGCTTCAGGAAGTAGAATTCTTGTTACCACGCGTACTAAGAAGGTAGCATCAGCCATGAATTCCTCCCAATTACTTCATTTAAAGCCACTAGAGAAAGATGATTGTTGGAAGCTATTTGTGAAGCTTGCATTTCATGACAAGGATGCCACCAAATATCCAAATCTCGTATCGGTTGGCAGAAAAATTGTTGAGAAATGTGGAGGGTTGCCTTTAGCTATAAAAACACTAGGAAATATCTTGCATGCAAAGTTCTCACAGCATGAATGGGTTAAGATATTGGAAAGTGACATATGGCACTTATCTGACAATGATAGCAACATTAACGCTGCACTAAGATTGAGTTACCACAATCTTCCTTCCCATCTAAAGCGTTGTTTCGCTTATTGTTCCATATTTCCCAAAGGTTATGAGTTTGAGAGGGGTCAATTAATCCAATTGTGGATGGCCGAAGGTTTGTTGAATTGCTGCCGAATATATGAGAGTGAAGAAGAGTTAGGTAGTGAGTTCTTCAATGATCTAGTGGCCAGGTCATTTTTCCAACAATCAATGCGCCGTGGTTCTCGCTTTGTTATGCATGATCTTCTCAATGATTTAGCAAAGTCGGTGTCTGGAGAATTTTGTTTACGGGTAGAGGGTGATTTGGTGCAAGATATACACAAGAGAACACGTCATTTTTCATGCTCTCAAAAACTTAGCCTTGGTGATAAATGTTTGGAGCATATTTGTGGGTGTGACAGATTGCGTTGTCTTATGGCACTCAGTTGGGAACCTGGCAGGAAAGGCTTGATGATAAACAGCAATGTCCAGTGTGTTTTATTTTCTACACTAAAATATTTGCGTGTTCTATCCTTCAGTGAGTGTCTCCTCACAGATTTAGTTGATGATATAAGCAATTTAAAGCTTTTGCGTTATTTAGACCTTTCGTACACTGAGATTAAAAGATTACCCGACTCCATTTGTGTGCTGCATAATTTGCAAACACTGAAATTGATATGGTGCTATCGTTTGACAGAGCTCCCTTCAGATTTGTACAAACTTGTCAACTTGCGTCACCTTGACTTGCGTATGAGCGAAATAAAGAAGATGCCAAAGCAAATGGGTAGGCTAAAACATCTTCGAACGCTGACTTGTTTTTACATTGGGAAGCATAGTGGGTTTGATATTGAGAAGTTGGGGAATCTCAACCATCTCCAAGGAACACTTTCAATTTTGAAGTTAGAAAATGTCATTGATCCTGCAGATGCCATGGAAGCTAATATGAAAGATAAAAGGCATTTAGAAGGATTAGTGTTGAATTGGGGTGACAAATTTGGAAGGTGCAGAGAAAATGATGACTCAATAATTGAAAGGCATGTATTGGAGGCTCTCCAACCAAATAGTAACTTGAAAAGGCTCACTATTTTACGTTATGATGGCACTAGCTTGCCAAGTTGGTTCAGCAGTTCTCATTTACCAAATTTAGTATCTATTAAGCTCTCTGAAAGTAAATTCTGTTTCATCTTGCCACCATTTGGGCAGCTCCCCTCTCTGAAGGAACTTTCTATTTCATGCTTTTATGGAATAGAGGTCATTGGGCCCGAGTTTTATGGTAATGATTCCTCAAACATTCCATTCAGATCTCTTGAAACTTTGAAATTTGAGGAAATGAGCGCATGGAAAGAATGGTGCAGTTGTGAAGGCCACAATGATGGTGAAGGTTTGTCTTGTCTTAAAGAGCTTTCTATAAGGCGTTGTCCTAGGTTGAGGAGGACACTGCCTCAACACCTTCGTTCTTTGCAAAAGTTGGTAATTTGTGATTGCCAACACCTTGAGGTTTCAATTCCCAGAGCTGCTAATATTCATGAGCTAGAACTGCACAAGTGTGAAAACATTCTGCTAAAAGATTTGCCATCTAGCTTGAAGAAGGCCACACTTCGTGGATCTCGCATCATTGAGTCGTGCCTCAAGCAAATTTTGTTAAAAAATGCCTTGCTTGAGAATTTGATAGTACATGACTTCCATTGTCCAAACCTAAAATGGTCCTCTTTGGATTTGCAAAGTCATGACTCTCTTGGCAATCTAAGTATAACAAGCTGGTACTCCTCCTCATTGCCTTTGGCACTGAACTTGTTTGCCAACCTTCATTCTCTATATTTGTGTGATTGTCCAAAACTTGAGTCATTTCCCAATGGAAGTTTGCCATCAAGCCTAGGCTGCCTCAACATTGAGGGTTGCCCCAAATTGGTTGCTTCTAGGGTGGAGTGGGGATTGTTCAAACTCTATTCTCTGAAAGAACTCAGGATTAGTGATGACTTTGAAAATGTGGAATCTTTCCCAGAGGAGAGGCTATTGCCACCCACTCTTAGTGATCTTTACTTAACTAGATGTTCAAAGCTAACAACAACAAACTCTATGGGTTTTCTCCACCTCAAATCTCTCAAATCCTTTTATATAGCCGATTGCCCTCGTCTTCAGCTTTTGCCAGAAGAGACTTTACCTAACTCCCTTTCTGTTCTGTGGATTCATAATTGCCTTCTACTTGAGCAGCGATACCAAAAAGATGGAGAGCACTGGCACAAAATTTGTCACATCCCTTCTGTGATGACTAGTTAG 3513 0.3968 MAELVGGAFLSACLQVTFDRLASSDIKDYFRGRKLKNELLKKLEIALNSINQVLEDAEERQYKNPNVMKWLDELKEVVYEAEQLLDEVATEASRQKLEAEFQPSNSKVLGFFTTIINPFDKEIASRVKEMLENLNFLVEQKDILGLKKGTCAGNEDGVSWKLSNRLPTTSLVDESGICGRDDDKEEIVKILLSDSVTCNRIPIITIVGMGGIGKTTLAQLVYNDQRIDNQFDLKAWVYVSHDFDVVFVTKAILKALHSLLEEEKDLNLLQLQLKQRLMGKKFFLVLDDVWNENYLIWEVLKAPFIYGASGSRILVTTRTKKVASAMNSSQLLHLKPLEKDDCWKLFVKLAFHDKDATKYPNLVSVGRKIVEKCGGLPLAIKTLGNILHAKFSQHEWVKILESDIWHLSDNDSNINAALRLSYHNLPSHLKRCFAYCSIFPKGYEFERGQLIQLWMAEGLLNCCRIYESEEELGSEFFNDLVARSFFQQSMRRGSRFVMHDLLNDLAKSVSGEFCLRVEGDLVQDIHKRTRHFSCSQKLSLGDKCLEHICGCDRLRCLMALSWEPGRKGLMINSNVQCVLFSTLKYLRVLSFSECLLTDLVDDISNLKLLRYLDLSYTEIKRLPDSICVLHNLQTLKLIWCYRLTELPSDLYKLVNLRHLDLRMSEIKKMPKQMGRLKHLRTLTCFYIGKHSGFDIEKLGNLNHLQGTLSILKLENVIDPADAMEANMKDKRHLEGLVLNWGDKFGRCRENDDSIIERHVLEALQPNSNLKRLTILRYDGTSLPSWFSSSHLPNLVSIKLSESKFCFILPPFGQLPSLKELSISCFYGIEVIGPEFYGNDSSNIPFRSLETLKFEEMSAWKEWCSCEGHNDGEGLSCLKELSIRRCPRLRRTLPQHLRSLQKLVICDCQHLEVSIPRAANIHELELHKCENILLKDLPSSLKKATLRGSRIIESCLKQILLKNALLENLIVHDFHCPNLKWSSLDLQSHDSLGNLSITSWYSSSLPLALNLFANLHSLYLCDCPKLESFPNGSLPSSLGCLNIEGCPKLVASRVEWGLFKLYSLKELRISDDFENVESFPEERLLPPTLSDLYLTRCSKLTTTNSMGFLHLKSLKSFYIADCPRLQLLPEETLPNSLSVLWIHNCLLLEQRYQKDGEHWHKICHIPSVMTS* 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0833 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 436 IPR027417 -
Apr2g0833 1170 Gene3D Ribonuclease Inhibitor 954 1163 IPR032675 -
Apr2g0833 1170 PANTHER OS05G0414200 PROTEIN 17 892 - -
Apr2g0833 1170 SMART LRR_typ_2 653 676 IPR003591 -
Apr2g0833 1170 SMART LRR_typ_2 606 629 IPR003591 -
Apr2g0833 1170 Gene3D - 14 128 - -
Apr2g0833 1170 PRINTS Disease resistance protein signature 203 218 - -
Apr2g0833 1170 PRINTS Disease resistance protein signature 276 290 - -
Apr2g0833 1170 PRINTS Disease resistance protein signature 373 387 - -
Apr2g0833 1170 PRINTS Disease resistance protein signature 604 620 - -
Apr2g0833 1170 Pfam Rx N-terminal domain 9 101 IPR041118 -
Apr2g0833 1170 Coils Coil 71 91 - -
Apr2g0833 1170 Gene3D Ribonuclease Inhibitor 570 953 IPR032675 -
Apr2g0833 1170 Pfam NB-ARC domain 181 423 IPR002182 GO:0043531
Apr2g0833 1170 Gene3D - 416 509 IPR036388 -
Apr2g0833 1170 SUPERFAMILY L domain-like 874 1150 - -
Apr2g0833 1170 PANTHER DISEASE RESISTANCE PROTEIN RP 17 892 IPR044974 GO:0006952
Apr2g0833 1170 Gene3D - 161 332 IPR027417 -
Apr2g0833 1170 SUPERFAMILY L domain-like 497 924 - -
Apr2g0833 1170 Coils Coil 36 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0833 Apr-Chr2 12339297 12343607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0833 204 682 WRKY Transcription Factor Family AT5G45050 23.883 3.89e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0833 - - gmx:100777510 1820.05