Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0831 ATGAGTGGTTTTTCCTTTGTCTTCACAAGCACAGTTTTCAAAGACAAGATGGAAAACAAGGAAAGGGGAAATTTTTCTGAATTGTTGTCAGAGCTGATAGTTTTGGCTGATGAGGTTGCTTCTCTTGCTAAGAACTCTGAAATTGAGGTAGATATTTTTGCTGAGTTTGCCATGTTGGTTGAGAAATTCCCACCAATTTTCAATGATTTGAGGGACAAAAGCACAGTCTTGGACAAGCCACCTATAAGAAAATCGTTGGAATCTCTTGAAAATGAGTTAAGGCGTGCCAAAGCTTTGACAAAAAGTACCAATTTGAGACAACCAATCAAGCAAACTGAGGACATAACACATGATATCGGTCGGTCATTAGGCCTTCTGCTTGTAGCTAGCCTTGAAGTGTCTGCGGATTTCAGAGAAAAGATTGGTACATTACAAAGACAATTGATGAATGCTAAATTTGATGGAAATTTAAGCCAAACTTCAAGCCCAAAATCAGAGTTAACCAGCACTGACACAAAGCTGACGGGGGAAATAGAAGAGGAAATAATCGATGTTTCTATTGATGATGTTGTTTTGCAGCTTAAGAATGGAAATGATGAAGAGTTTGCAATTGCACTTTTGAGACTAAAGGAGTTCTTGAGGAATGAAAGACTGGATGGTGGTTTGATTAATGAGGAAGCAATTATTGCCATTCTTTTCAATCGTCTAGGTTCATGTAAGGCTGACAATAGGCTTGCCATCATGCGATTGCTAAGAAGTTTTGCTTTTGGAAATGATGAGAAAAAGGAGAAGATGGTAGATATTGAGTTTTTATCAGCAGTGGTGAAGTCATTGACAAGAGATTCAGAAGAGAGAAGGGAAGCAGTGGGGCTGTTGCTAGACCTCTCTGACATTTCTGCAGTTCGACGGCGTATTGGAAGAATTCAAGGGTGTATTGTTATGTTAGTTGCAATCCTTAATGGCGATGACCCTGTGGCTTCACATGATGCAGCAAAGTTATTGGATATATTGTCTAGTAATACTCAAAATGCACTTCATATGGCTGAAGCTGGCTACTTTAGGCCACTAGTGCACTATTTGAAGGAAGGGCCTGACATGAACAAGATCCTAATGGCAACAGCACTTTCTAGGTTGGAGCTCACTGATCACAGCAAACTGTCCCTTGGAGAAGATGGGGCAATTGAGCCCCTTGTCAGTATGTTTAGTACTGGAAAATTTGAGTCCAAGTTATCAGCACTAAATGCACTACAAAATCTGTCTAGCTTGACAGAAAATGTGCAACATTTGATCAGATCTGGAATTGCTGGATCTCTGCTACAACTTCTTTTCTCAGTAACATCTGTGCTTATGACTTTACGAGAGCCTGCATCAGCTATTCTCGCAAGAATCGCTCAGTCGGAATCCATTCTTGTTAATGAAGATGTGGCTCAACAGATGCTTTCACTTTTGAACCTATCTAGCCCCATAATTCAAGGTCATCTGTTAGAAGCTCTAAATAACATAGCTGCACATCCTGGTGCATCCAAAGTGAGAAGCAAAATGAAAGAAAAAGGTGCACTTCAGCTACTCTTACCCTTTCTGAAGGAAAACAATATCAAAATCCGGAGTAAGGTATTACATTTGCTGTACACCCTCTCTAAAGATCTAACAGATGAGTTGACTGAACATCTTGATGAAACTCATCTTTACAACATTGTTGATATAGTTTCATCATCAACATCGAAGATTGAACAAGCAGCTGCAGTTGGCATACTGAGTAATCTTCCTGCTAGTGATAAAAAAGTGACAGATATACTAAAGAGGGCAAATTTGCTGCCAATTTTAATAACCATTATGAATTCTGTCACAGGAAGTAATTCATCAACAACTAATAGCTTAGCAGATAGTATAGCAAGTGTTATTATACGCTTCACAAATCCCTCCGACAAGAAATTACAACTTCTTTCAGCAGAGCATGGTGTGATTTCTTTGCTAGTAAAACTGCTCTCAAGTGGTTCAGCAATCACAAAATCGAAGGCTGCAATCTCGCTGGCTCAACTATCGCAGAATTCTGTGTCTCTTAGGAAGTCTAGAAAGTCAAGGTGGTTGTGTGTTTCACCCTCCGTGAATGCATATTGTGAAGTCCATGATGGATATTGCTTTGTAAACAGAACATTTTGTTTGGTCAAGGCTGGTGCTGTTTCTCCCCTTATACAATTATTGGAAGATCCGGGGAGAGAAGTAGTTGAAGCTGCTTTGTATGCTCTCTCAACTCTTCTGCAAGATGAAATTTGGGAAGGTGGTGTCAATTGCATTGCCAAGTTGTCAGGTGTGCAGGGTATTATAAGAAGTCTTCAAGTTGTGGATGCAAAGGTTCAAGAAAAAGCATTATGGATGTTGGAGAGAATATTCAAGTTTGCAGAACATAGAGTAAAATATGGAGAATCTGCTCAGGTGGTTCTTATTGATCTGGCCCAGAAGAGTGATTCTAGATTGAAATCAACAGTTGCCAAAGTATTAGCTGAGCTGGAGTTGTTGCAAGCTCAATCAAGTTACTTTTGA 2541 0.3967 MSGFSFVFTSTVFKDKMENKERGNFSELLSELIVLADEVASLAKNSEIEVDIFAEFAMLVEKFPPIFNDLRDKSTVLDKPPIRKSLESLENELRRAKALTKSTNLRQPIKQTEDITHDIGRSLGLLLVASLEVSADFREKIGTLQRQLMNAKFDGNLSQTSSPKSELTSTDTKLTGEIEEEIIDVSIDDVVLQLKNGNDEEFAIALLRLKEFLRNERLDGGLINEEAIIAILFNRLGSCKADNRLAIMRLLRSFAFGNDEKKEKMVDIEFLSAVVKSLTRDSEERREAVGLLLDLSDISAVRRRIGRIQGCIVMLVAILNGDDPVASHDAAKLLDILSSNTQNALHMAEAGYFRPLVHYLKEGPDMNKILMATALSRLELTDHSKLSLGEDGAIEPLVSMFSTGKFESKLSALNALQNLSSLTENVQHLIRSGIAGSLLQLLFSVTSVLMTLREPASAILARIAQSESILVNEDVAQQMLSLLNLSSPIIQGHLLEALNNIAAHPGASKVRSKMKEKGALQLLLPFLKENNIKIRSKVLHLLYTLSKDLTDELTEHLDETHLYNIVDIVSSSTSKIEQAAAVGILSNLPASDKKVTDILKRANLLPILITIMNSVTGSNSSTTNSLADSIASVIIRFTNPSDKKLQLLSAEHGVISLLVKLLSSGSAITKSKAAISLAQLSQNSVSLRKSRKSRWLCVSPSVNAYCEVHDGYCFVNRTFCLVKAGAVSPLIQLLEDPGREVVEAALYALSTLLQDEIWEGGVNCIAKLSGVQGIIRSLQVVDAKVQEKALWMLERIFKFAEHRVKYGESAQVVLIDLAQKSDSRLKSTVAKVLAELELLQAQSSYF* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0831 846 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 392 434 IPR000225 GO:0005515
Apr2g0831 846 SUPERFAMILY ARM repeat 369 800 IPR016024 -
Apr2g0831 846 Gene3D - 711 844 IPR011989 -
Apr2g0831 846 Pfam Armadillo/beta-catenin-like repeat 720 752 IPR000225 GO:0005515
Apr2g0831 846 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN-LIKE 17 846 - -
Apr2g0831 846 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 17 846 - -
Apr2g0831 846 Coils Coil 86 106 - -
Apr2g0831 846 Gene3D - 330 693 IPR011989 -
Apr2g0831 846 Gene3D - 200 326 IPR011989 -
Apr2g0831 846 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 725 752 IPR000225 GO:0005515
Apr2g0831 846 SUPERFAMILY ARM repeat 186 444 IPR016024 -
Apr2g0831 846 SMART arm_5 258 297 IPR000225 GO:0005515
Apr2g0831 846 SMART arm_5 381 421 IPR000225 GO:0005515
Apr2g0831 846 SMART arm_5 507 547 IPR000225 GO:0005515
Apr2g0831 846 SMART arm_5 642 682 IPR000225 GO:0005515
Apr2g0831 846 SMART arm_5 714 754 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0831 Apr-Chr2 12284455 12290318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0831 197 846 U-box Gene Family AT1G76390 28.963 2.74e-47 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0831 K08332 - gmx:100791453 1347.41