Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0810 ATGGATGGATGCCATTGTAGTGCATACCCACTAATCTCTGCCTCCGACTCCGATTCAGAAATCAATCCAGTCAACAGCGATAATCCATACTTCAATATAAAGTTTGAGTACACGAATACGTCCGTTTTGAATGCTAGAAGCTCCCACGTCAATGGTGATACTACCTATCACAAATTTTCAAATATCTCAAAGGATGAATTGATGCAGGAAACAACCATTGTTTCTTGGCTTTCCCAAATGTGTGTGCCATGTTTTGCTCACAAGTTTGTAGTGGAAAATATATTGAAATGTGCACGTTGGATGGCTAGTAGCACCTGGAATAAGTGCACAAAGGTTCTGTATATGTGTGTCGATGTGGTAATCACTAGGCCCAACGAAGAAGTGGAAGATCGTCGTGAAGAAGAAGTGGAAGACGACGACGAAGACGAAGACGAAGACGACGACGACGACGACGATGATCGATTGGTGCCAGCAGCTAGGTCAGTAGTTGAGGGGTTGGAGGTTGAAAAAGATGGGTCTGCTGCGAGAACGTGTGCTATTTGTTTTGAAGATTTTCTCGATGGTGTTCGCATGCCATGTCTGCACATGTTTCATAAAACGTGCATCGTCGATTGGTTGCAAGTAGGCCATTCATGTCCTGTGTGTCGTTTCAAGATGGCCACGGATGAAAACAAGTGA 678 0.441 MDGCHCSAYPLISASDSDSEINPVNSDNPYFNIKFEYTNTSVLNARSSHVNGDTTYHKFSNISKDELMQETTIVSWLSQMCVPCFAHKFVVENILKCARWMASSTWNKCTKVLYMCVDVVITRPNEEVEDRREEEVEDDDEDEDEDDDDDDDDRLVPAARSVVEGLEVEKDGSAARTCAICFEDFLDGVRMPCLHMFHKTCIVDWLQVGHSCPVCRFKMATDENK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0810 225 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 73 219 - -
Apr2g0810 225 SMART FANCL_C_2 174 224 - -
Apr2g0810 225 ProSiteProfiles Zinc finger RING-type profile. 178 216 IPR001841 -
Apr2g0810 225 SMART ring_2 178 215 IPR001841 -
Apr2g0810 225 MobiDBLite consensus disorder prediction 131 153 - -
Apr2g0810 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 158 225 IPR013083 -
Apr2g0810 225 MobiDBLite consensus disorder prediction 127 155 - -
Apr2g0810 225 PANTHER F6A14.12 PROTEIN-RELATED 73 219 - -
Apr2g0810 225 SUPERFAMILY RING/U-box 177 221 - -
Apr2g0810 225 Coils Coil 125 145 - -
Apr2g0810 225 Pfam Ring finger domain 177 216 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0810 Apr-Chr2 11478218 11478895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0810 157 223 C3H Transcription Factor Family AT5G15820 41.333 3.89e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0810 - - aprc:113855623 419.853