Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0786 ATGATTTTGGAAGCTGCCATGGTTGATCAGGTCCAACACCCCACAATCTTGGACAAGGTTGCTGGTCAGCTCTATCTCCGTTCTAGTCTTTCATCTAGTATCAAGAGTTATGATGGAGCCGTCCGTCATCCTGCACTCTATCAAAGACCCTCATTTGGGAATTACTCAAATGCTGCATTGCAGTATCCAGTGATGCCTGGTTGCAAAACTACCATTGATGTGTCTGCTACTGCAGCAACACCCGCCTCTCCTGTTTTTGTTGCAGCTCCAGCAGAGAAAGGAAATTTCATGATAGACTTTCTCATGGGTGGTGTTTCAGCTGCTGTCTCCAAAACTGCTGCTGCCCCCATTGAACGGGTTAAGCTGTTGATTCAGAACCAGGATGAAATGATCAAATCTGGAAGGCTTTCTGAGCCCTACAAGGGTATTGGTGATTGTTTTAAGAGAACAATGCAGGATGAGGGTGTTGTTTCACTGTGGAGAGGCAACACTGCAAATGTCATCCGCTATTTCCCCACCCAGGCATTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAATTTTAAGAAGGATAGGGATGGTTATTGGAAATGGTTTTCTGGCAACTTGGCCTCTGGAGGTGCTGCTGGTGCATCATCTCTGTTGTTTGTTTACTCTCTTGACTATGCCCGTACCCGTCTCGCAAATGATGCAAAGGCTGCGAAGAAAGGTGGTGAAAGACAATTCAATGGTCTTGTTGATGTCTACAGGAAGACATTGGCGTCTGATGGTGTTGCTGGTCTTTACCGTGGTTTCAACATCTCATGTATTGGAATCATTGTGTATCGTGGACTATACTTTGGAATGTATGATTCCCTCAAACCTGTGGTTCTGACAGGAAAATTGCAGGATAGCTTTTTTGCCAGTTTTGCTCTAGGATGGCTCATCACCAACGGTGCAGGTCTAGCATCATACCCAATTGACACTGTTAGAAGAAGAATGATGATGACCTCTGGTGAAGCCGTGAAGTACAAGAGTTCTATGGATGCATTCGCACAAATCTTGAAGAATGAAGGTGCCAAGTCATTGTTTAAGGGTGCTGGTGCCAACATCCTTCGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGCTGCAGGTGCTTGTGTTCGGCAAGAAGTATGGATCTGGTGGCGCATAA 1191 0.4568 MILEAAMVDQVQHPTILDKVAGQLYLRSSLSSSIKSYDGAVRHPALYQRPSFGNYSNAALQYPVMPGCKTTIDVSATAATPASPVFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMQDEGVVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFSGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLASDGVAGLYRGFNISCIGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFAQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVFGKKYGSGGA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0786 396 PRINTS Mitochondrial carrier protein signature 99 112 IPR002067 GO:0055085
Apr2g0786 396 PRINTS Mitochondrial carrier protein signature 112 126 IPR002067 GO:0055085
Apr2g0786 396 PRINTS Mitochondrial carrier protein signature 162 182 IPR002067 GO:0055085
Apr2g0786 396 PRINTS Mitochondrial carrier protein signature 214 232 IPR002067 GO:0055085
Apr2g0786 396 PRINTS Mitochondrial carrier protein signature 264 282 IPR002067 GO:0055085
Apr2g0786 396 PRINTS Mitochondrial carrier protein signature 308 330 IPR002067 GO:0055085
Apr2g0786 396 SUPERFAMILY Mitochondrial carrier 94 381 IPR023395 -
Apr2g0786 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 299 385 IPR018108 -
Apr2g0786 396 PRINTS Adenine nucleotide translocator signature 96 108 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr2g0786 396 PRINTS Adenine nucleotide translocator signature 140 161 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr2g0786 396 PRINTS Adenine nucleotide translocator signature 173 185 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr2g0786 396 PRINTS Adenine nucleotide translocator signature 199 212 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr2g0786 396 PRINTS Adenine nucleotide translocator signature 304 320 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Apr2g0786 396 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 8 396 - -
Apr2g0786 396 Pfam Mitochondrial carrier protein 300 387 IPR018108 -
Apr2g0786 396 Pfam Mitochondrial carrier protein 198 293 IPR018108 -
Apr2g0786 396 Pfam Mitochondrial carrier protein 95 191 IPR018108 -
Apr2g0786 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 94 187 IPR018108 -
Apr2g0786 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 199 291 IPR018108 -
Apr2g0786 396 Gene3D Mitochondrial carrier domain 97 392 IPR023395 -
Apr2g0786 396 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 8 396 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0786 Apr-Chr2 11000569 11004684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0786 7 396 Antiporters AT5G13490 81.218 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0786 K05863 - gmx:100789942 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0786 2 11000569 11004684 Apr2g0786 2 11000569 11004684 ECH