Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0780 ATGTCCAACACACATTTCACAGTGAACGTTCTTGAGCAATGCAGAATCACTCCCCCACCCAACACAACTCCAACAACCTCTATCCTACCACTAACCTTCTTTGATCTTCCTTGGCTCTTCTTCTCTCCAAGCCAACCCCTCTTTTTCTATGAATTCCCAACCTTTCACTTCACAACTACAATACTCCCAAAACTAAAGCAATCTCTCTCCCTCACACTTCAACATTACTATCCTTTTGCTGGTAGCTTTGTGCCATCACATGATCACTCCAAACCTCATCTCATTTACACTAATAACAACTCAGTTCCATTGACAATATCTGAGTCAAATGGCAACTTCAACCACTTTTGTAGCAATCACATTAGAGATGTCAAAGATTTCCACTTACTTGTACCCAAATTGGCATGTGAAGGTAATGAGTTTCCTTTGCTAGCTATTCAAGTAACATTATTCCCACGTGTTGGCATTTGCATCGGTATTACTTTTCACCATGTTGTTGCTGATGGGAGAACCTTCCACAATTTCTTCAAGACATGGGCCTCATATTGTAGCTCAGGGTCAGCTTCAACATTCCGACCAAAGTCACTGCCATGTTGTGACCGAAGTGTGATTGTTGACGCAAATGGCCTTGAAGAGGTTTTCTTGAAAGAATGGAAAAAAAGAGGACTAGCACAGGGTATTGCCATAGGTAGAGAAGCCAAACTGGTAGATCTTTCAGTCTTGGTTCGAGCCACTTTCTTAATGGGTACCACTCAAATGGAGAAAATTAAATGCTTGATTATTAATTGTTGCAAGGATAAGAACCAGCCTCAGCCTGTTCATTTATCTGCTTATGTGTTAGCTTGTGCTTTTACATGGGTTTGTCTACTCAAAACCCAACAAAGTGTGAATGTGAAAGCAATCCATGAAGACAACACATACTTGGGATTCATTGCTGGTGGAATAACTAGATTGGACTATGCGGTGCCAATGACGTATTTGGGTAATTGTGTTGGCTTTGGCAGGGCATCAGTGAAGAGAGAAGACATACTAGGAGAAGATGGGGTTGTTGCTGCAGCTAAAGCAATTGGAAGCACGATTAAGAAACTTGATGCATCAATTTTTGCGGGTGCAGAGAAATGGATTTTGGATTGGGATGTGTTACATGGGTCAAAACAGCACGTGTATGCTACCTGGTCTCCAAAATTGAAGCCTTATGAATTAGATTTTGGGTGGGGGAGGCCCAAGAAAATAGAGGAGATCTCAATTGATTTTACAGGAGCTTTTTCACTCATACAAAGCAGAGACATTGAGGGTGGAATTGAAATAGGCTTAGCTTTACCCAAGAATGAAATGGATACTTTCTCCATTTTGTTCACCAAAGGGCTTGATGCTCTACCATGA 1383 0.4136 MSNTHFTVNVLEQCRITPPPNTTPTTSILPLTFFDLPWLFFSPSQPLFFYEFPTFHFTTTILPKLKQSLSLTLQHYYPFAGSFVPSHDHSKPHLIYTNNNSVPLTISESNGNFNHFCSNHIRDVKDFHLLVPKLACEGNEFPLLAIQVTLFPRVGICIGITFHHVVADGRTFHNFFKTWASYCSSGSASTFRPKSLPCCDRSVIVDANGLEEVFLKEWKKRGLAQGIAIGREAKLVDLSVLVRATFLMGTTQMEKIKCLIINCCKDKNQPQPVHLSAYVLACAFTWVCLLKTQQSVNVKAIHEDNTYLGFIAGGITRLDYAVPMTYLGNCVGFGRASVKREDILGEDGVVAAAKAIGSTIKKLDASIFAGAEKWILDWDVLHGSKQHVYATWSPKLKPYELDFGWGRPKKIEEISIDFTGAFSLIQSRDIEGGIEIGLALPKNEMDTFSILFTKGLDALP* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0780 460 PANTHER - 1 458 - -
Apr2g0780 460 Pfam Transferase family 8 449 - -
Apr2g0780 460 Gene3D - 239 459 IPR023213 -
Apr2g0780 460 Gene3D - 7 227 IPR023213 -
Apr2g0780 460 PANTHER MALONYL-COENZYME A:ANTHOCYANIN 3-O-GLUCOSIDE-6''-O-MALONYLTRANSFERASE-LIKE 1 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0780 Apr-Chr2 10773589 10775014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0780 65 448 Monolignol Biosynthesis Gene Families AT5G48930 22.250 3.58e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0780 - - gmx:100817166 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0780 2 10773589 10775014 Apr2g0780 2 10773589 10775014 ECH