Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0777 ATGGCTCAGAAAACAGAGAAAGAAGAAACCGAATTCAAAGTTCCTGAAACCATTACGCTCTGCGTGAACAACTGCGGCGTTATCGGTAACCCTGCCACCAACAACATGTGCCAGAAGTGCTTCACCGCCTCCACCGCCACCACCTCTACCGCCGGAATCTCGCCGCCGTCGTCCAGATCCGGCGTTTCTTCCCGCTGTTCCAAGAGATCCTTCCCGGAAGAGCCCTCGCTGCCCGCCGATCCTCCGTCCTCCGACCAATCCGCCCCGTCCGAGGCCAAGCGCGTCGTCAACCGCTGCTCCGGTTGCCGGCGGAAGGTCGGACTCACGGGATTTCGCTGCCGGTGCGGCGAACTCTTCTGCGCCGAGCACCGGTACTCCGACCGCCACGACTGCAGCTACGACTACAAAGCCGCAGGAAGAGAAGCCATAGCCAGAGAGAATCCGGTGATCAGAGCCGCGAAGATCGTCAAGGTCTGA 477 0.6038 MAQKTEKEETEFKVPETITLCVNNCGVIGNPATNNMCQKCFTASTATTSTAGISPPSSRSGVSSRCSKRSFPEEPSLPADPPSSDQSAPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVIRAAKIVKV* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0777 158 MobiDBLite consensus disorder prediction 47 92 - -
Apr2g0777 158 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Apr2g0777 158 MobiDBLite consensus disorder prediction 47 70 - -
Apr2g0777 158 Gene3D - 75 154 IPR035896 -
Apr2g0777 158 Gene3D - 1 69 - -
Apr2g0777 158 SUPERFAMILY AN1-like Zinc finger 85 152 IPR035896 -
Apr2g0777 158 SMART AN1_Zf_4 99 136 IPR000058 GO:0008270
Apr2g0777 158 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Apr2g0777 158 Pfam AN1-like Zinc finger 99 136 IPR000058 GO:0008270
Apr2g0777 158 ProSiteProfiles Zinc finger AN1-type profile. 93 139 IPR000058 GO:0008270
Apr2g0777 158 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 1 158 - -
Apr2g0777 158 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 60 - -
Apr2g0777 158 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 158 - -
Apr2g0777 158 Pfam A20-like zinc finger 20 41 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0777 Apr-Chr2 10555194 10555948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0777 8 158 C2H2 Transcription Factor Family AT3G52800 39.881 9.24e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0777 - - gmx:100787293 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0777 2 10555194 10555948 Apr2g0777 2 10555194 10555948 ECH