Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0772 ATGAGTGTTATGTATAGTCCTGTTCTCAAGTACTCAGATGTGGAGCTAAGAAGAAATCAAGAAATGGATTCAAGTATTGGACATCCACAACAGCACTGTCACCAACCCAATTCTGGACTATTTAGGTACCGTTCTGCTCCAAGCTCATTGCTGGCAAGCCTTATTGACAACAACATTAATGGCTGTCCTAATGAGGAATCTTTTACAAGTGAGGACCATCACCATTATCTTCCATCAACAACTTCAGAAATGGAGACCATGTTGTCCAAATTGGTATCATCCAACAATGGATGGAGTAGTTCTGAGTCATTGCAAGAGTTTGGAGGCAAGCCTGTGAAGCAGGAAATGGGGGCATCTGTTCCACAAGGACCAAAACAACAACAACAGAATGGTTATTCTTATGGGGGGTCTCAGTTAATTTACCAGTCGCAGCAAATTCAAGGCTTGCCAAATGTTTCTTCCAGCGCTGCTGGCAATGCTTTTGATGGCTCTTTTGGTGTGGTGAACACCATGACTTCAGAAAACTCCACTCAATCTAAAATGGGTGTCAGGAATTGCTCCAATCTCCTTAGGCAAAAGAGCTCCCCTGCCGGATTTTTCTCCATTGAAAATGATCTTGCAGCATTGAGAGAGGTAGGAAGCTTTAAAGCCAGTGATGTTACAAATAGACAGGCTAATGCATCAACTAGTGGGTTGCATGGTACTCTTATTTTCTCATCTAGGCCATCCTCGTGCATGAAAAGGATGCCACAAATAGCTGAAAATGGAAATGAAAGCCTAGAAGAAAATTGTGTCCAAAGTAGAAACCTGGTAAATGACAGTGGCAACTCCAGATGTTACATACCTAACTTCAGTGAAATCTGGGACACTTCTGCATTCACTGCCCAAAAATCAGAAAGTGAAGATGAAATCATGTTTTCCACTTCAAATGGCTTGGAATCTCAGGAAGCTGATATTTGCTATCAAAATCTGGGTTTGACTCACCATTTGAGTCTTCCTAGTTCTTCTACTAAGATGACATCCATAGAGAAGATTCTTCAAATTCAAGGATCTGTTCCTTGTAAAATTCGAGCCAAAAGAGGCTTTGCCACTCACCCAAGAAGCATTGCAGAGAGGGTAAGAAGAACAAGAATTAGTGAAAGAATCAAGAAATTGCAAGGCCTTTTCCCAAAATCCGATAAGCAAACAAGCACAGCAGATATGTTAGATTTGGCAGTTGAGTACATTAAGGATCTGCAGCAACAAGTTAAGATACTCACAGATTGCAAGGCAAAGTGCAAATGTACAAGTTATGAGAAGAAGCAATGCACTAAAGCTTGTGCCTGA 1326 0.4125 MSVMYSPVLKYSDVELRRNQEMDSSIGHPQQHCHQPNSGLFRYRSAPSSLLASLIDNNINGCPNEESFTSEDHHHYLPSTTSEMETMLSKLVSSNNGWSSSESLQEFGGKPVKQEMGASVPQGPKQQQQNGYSYGGSQLIYQSQQIQGLPNVSSSAAGNAFDGSFGVVNTMTSENSTQSKMGVRNCSNLLRQKSSPAGFFSIENDLAALREVGSFKASDVTNRQANASTSGLHGTLIFSSRPSSCMKRMPQIAENGNESLEENCVQSRNLVNDSGNSRCYIPNFSEIWDTSAFTAQKSESEDEIMFSTSNGLESQEADICYQNLGLTHHLSLPSSSTKMTSIEKILQIQGSVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQQQVKILTDCKAKCKCTSYEKKQCTKACA* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0772 441 Gene3D - 364 437 IPR036638 GO:0046983
Apr2g0772 441 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 29 432 - -
Apr2g0772 441 Pfam Helix-loop-helix DNA-binding domain 368 413 IPR011598 GO:0046983
Apr2g0772 441 MobiDBLite consensus disorder prediction 100 133 - -
Apr2g0772 441 SMART finulus 368 418 IPR011598 GO:0046983
Apr2g0772 441 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 29 432 - -
Apr2g0772 441 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 362 412 IPR011598 GO:0046983
Apr2g0772 441 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 365 428 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0772 Apr-Chr2 10420308 10423667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0772 32 418 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 35.539 1.42e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr2g0772 HLH 5.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0772 - - gmx:100812802 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0772 2 10420308 10423667 Apr2g0772 2 10420308 10423667 ECH