Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0753 ATGTGGAGATTTAAGCCATTCATGCACAAAGAGCAAACTGGTCTTGAAGGCCGCACCATAGATGTTGGCAATCTTAAAATAAATGTCGTTAAGGCCATTGCTGAAGGAGGGTTCTCTTGTGTCTACTTAGCTCGTGATGCTGTACATATGTCAAAGCAATATGCATTGAAACACATGATATGCAATGATGAAGAATCACTTGCATTGGTGAAAAAGGAAATATCTGTGATGAAATTGCTGGTAGGACATCCTAATGTTGTCACACTTCATTCACATACAATCTTTGATATGGGTAGGACAAAAGAGGCTTTTATTGTAATGGACTTTTGTGAGAAGTCTCTGGTTAATGTTCTAGAGAGCCGGGGAGCTGGTTATTTTGATGAGAAACAAGTTCTTTTAATCTTCAGGGACGTGTGTAATGCAGTTTTTGCCATGCACTGTCAGTCTCCACCAATTGCTCACAGAGACTTGAAAGCAGAGAATCTTTTATTAGGTTCTGATGGCTCATGGAAGTTATGTGATTTTGGAAGCACTTCCACCAATCACAAACGCTTTGAGAAGCCTGAGGAAATGGGGATTGAGGAAGACAATATCAGGAAGTACACAACCCCTGCCTACAGGGCCCCTGAGATGTGGGATCTGTTCCTGAGAGAAGTCATTAATGAGAAAGTGGACATATGGGCACTTGGGTGTCTCCTTTTTCGCATATGCTACTTCAAAAGTGCATTTGATGGGGAGTCAAAGCTCCAAGTCTTAAATGGAAACTATCGCATTCCTGATTTACCCAAATACAATTCATCTGTCACGGATTTGATCAGAGACATGCTCCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGTCTGGTTTCGTGTTAATGAGCAGCTACCTATTAATTTACAGAAGTCATTACCTGACAGGCCACCTGAATCACCCTCTTCCAACGAAGGTGTGTCAATGTCCAATAACAAAACACATCCAGTGCCTCGAAGGAATCCACCTCCTCCACCTTCATCTGGAGAACCCAAAAGTACACCACAGCCATCGCATTCTTCTAGGGGAGCAGGAAGTGGGGGGCAACTTGGTGCTTTCTGGTCCACTCAGCATGCAAAGGATTCTCTTGGCACTGAAGGAAAGAGCAAACCAATTTTTGATGAAGAACCATCCAGCCACCATATATCATTGAAACATGATAGAATTCGTCCAGACAATGAACAATTACCCAAAAATGCCAATATTAACAAAGTGGTTAACACACAAACTCATACTGTAAAAAGCAGCGCACAAGGAAAATTCCACAATCCTGATACCGTACCCTCCAAGGATTTTGAAATAAACTTTTTTCAGGATAAAGATCCTGCTGGTCAAAGGCGAATGCCAACTATGGAGAATACATCTAACTTCCAAGACCAGGCTTTTAACACTTTTGTTGCAGAATTTGATACCGCTAAGCTCAACTCTGGACTTGGTAACAAATCTGAAAGGGAAGAAGAATTGGAGGCTGAGGTGGAGAAACTCAAAGAACAGTTGGAGGAAGCCAACTTGGAAAAAGCTGAGATAACGGCTAAGTATGAAAAGCTTTCTGCTATCTGCCGATCACAAAGGCAAGAATTACAGGAACTCAAGCAAGCACTTGCAGCAAGGACTCCTTCACCAAATAGAGAAAAATTGAGAACCTCTCCTGTAGTTACATCATCTGCATCAGATAAAACTGAATGGAAAACTCCTAGTTCAGAGCCAAAGTCATGGCAAGCTTTTCCAGAGGAACCCCAGCCACAAAAGTCCCTTTCAGCAGAAAACACTTCCAAATCTGTTCGGTCAAGAAATGGTCAACAAAACAAGCAACCAGCACAATTAGCTACTGATTTTGATACATGGGGTTTTGGCACAGATAGCTTCAGCGCTGTGCGTGCTGGCAGCCCACAGATGCCAAGACCAAGTGAAGGAGCTAAGTCTCAGGTTTTTGGTGAGGCAAAGGCCTTTGAGAGCAAGTCATCTTCTCAACCAGCTGGATGGGCTGGTTTTTAA 2031 0.4284 MWRFKPFMHKEQTGLEGRTIDVGNLKINVVKAIAEGGFSCVYLARDAVHMSKQYALKHMICNDEESLALVKKEISVMKLLVGHPNVVTLHSHTIFDMGRTKEAFIVMDFCEKSLVNVLESRGAGYFDEKQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGSDGSWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYNSSVTDLIRDMLQARPDDRPDITQVWFRVNEQLPINLQKSLPDRPPESPSSNEGVSMSNNKTHPVPRRNPPPPPSSGEPKSTPQPSHSSRGAGSGGQLGAFWSTQHAKDSLGTEGKSKPIFDEEPSSHHISLKHDRIRPDNEQLPKNANINKVVNTQTHTVKSSAQGKFHNPDTVPSKDFEINFFQDKDPAGQRRMPTMENTSNFQDQAFNTFVAEFDTAKLNSGLGNKSEREEELEAEVEKLKEQLEEANLEKAEITAKYEKLSAICRSQRQELQELKQALAARTPSPNREKLRTSPVVTSSASDKTEWKTPSSEPKSWQAFPEEPQPQKSLSAENTSKSVRSRNGQQNKQPAQLATDFDTWGFGTDSFSAVRAGSPQMPRPSEGAKSQVFGEAKAFESKSSSQPAGWAGF* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0753 676 CDD STKc_GAK_like 26 298 - -
Apr2g0753 676 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0753 676 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0753 676 MobiDBLite consensus disorder prediction 543 676 - -
Apr2g0753 676 PANTHER NUMB-ASSOCIATED KINASE, ISOFORM A 1 664 - -
Apr2g0753 676 MobiDBLite consensus disorder prediction 375 406 - -
Apr2g0753 676 MobiDBLite consensus disorder prediction 554 629 - -
Apr2g0753 676 Gene3D Transferase(Phosphotransferase) domain 1 10 306 - -
Apr2g0753 676 Coils Coil 490 545 - -
Apr2g0753 676 MobiDBLite consensus disorder prediction 660 676 - -
Apr2g0753 676 MobiDBLite consensus disorder prediction 301 328 - -
Apr2g0753 676 MobiDBLite consensus disorder prediction 329 344 - -
Apr2g0753 676 MobiDBLite consensus disorder prediction 301 411 - -
Apr2g0753 676 Coils Coil 676 676 - -
Apr2g0753 676 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0753 676 SUPERFAMILY Protein kinase-like (PK-like) 28 342 IPR011009 -
Apr2g0753 676 PANTHER SERINE/THREONINE PROTEIN KINASE 1 664 - -
Apr2g0753 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Apr2g0753 676 MobiDBLite consensus disorder prediction 345 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0753 Apr-Chr2 10045240 10050330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0753 26 292 Miscellaneous Gene Families AT2G34180 28.470 9.25e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Apr2g0753 Pkinase 2.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0753 K08853 - gmx:100808507 1101.66