Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0702 ATGATGCCAGGAAGTGGACAGTTAACAGTTCCTCCGGGCTTCAGGTTCCACCCTACTGATGAGGAGCTTCTCTACTATTACCTGAGGAAGAAAGTTTCTTATGAAGCCATTGATCTTGATGTCATTAGAGAAGTAGATCTCAACAAACTTGAGCCTTGGGACCTCAAAGATAAATGTAGGATTGGGTCAGGGCCTCAGAATGAGTGGTATTTCTTCAGTCACAAGGACAAGAAATACCCAACAGGAACTCGAACAAATAGAGCAACTACAGCTGGTTTTTGGAAAGCAACTGGAAGGGACAAGGCCATATATCACACTAATTCCAAAAGGATTGGCATGAGGAAAACCCTAGTCTTCTACACTGGTCGTGCTCCTCATGGCCAGAAGACTGATTGGATCATGCATGAGTACCGCCTTGATGATGATGATGCAGAGGTTCAGGAAGATGGGTGGGTGGTATGCAGGGTCTTCAAAAAGAAAAACCAGACTAGAGGTTTCCAACAAGAAATTGAAGAAGAAGAGCACTTAACCCACATGAGAACAAGCGGTCCTTGCCAGGTTCTAGAGCCAAAACATCATCATCATCATCACATGCAAGGACTATATGATTACAGTAGCTTTGATGGGACAATGCACCTACCACAGTTGTTCAGTCCAGAATCAGCTGTTGCTCCCACTTCTTCCTTGGCTTCATCAATGAATGCCATGGACATCCTTGAGTGCTCTCAAAATCTTCTGAGGCTCACAACTACATCTGGCTGTGGACTTAATCTTATGCAACAACAAGGAGAGAGGTTCAATGGTGATTGGTCATTCTTGGACAAGTTACTAGCATCCCATCATGGCATGGATCAGCATCATCCACAAAGCAAATGTAACCCTCCTACTCATCAAGCTCCACCTCCTGTGAGCACTTCTGCTCAGAAATTCCCATTTCATTACCTTGGTAATGAGACCCATGATATTATGAAATTTTCCAAGTAG 984 0.44 MMPGSGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDDDDAEVQEDGWVVCRVFKKKNQTRGFQQEIEEEEHLTHMRTSGPCQVLEPKHHHHHHMQGLYDYSSFDGTMHLPQLFSPESAVAPTSSLASSMNAMDILECSQNLLRLTTTSGCGLNLMQQQGERFNGDWSFLDKLLASHHGMDQHHPQSKCNPPTHQAPPPVSTSAQKFPFHYLGNETHDIMKFSK* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0702 327 PANTHER NAC (NO APICAL MERISTEM) DOMAIN TRANSCRIPTIONAL REGULATOR SUPERFAMILY PROTEIN-RELATED 6 313 - -
Apr2g0702 327 MobiDBLite consensus disorder prediction 283 304 - -
Apr2g0702 327 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Apr2g0702 327 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 313 - -
Apr2g0702 327 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Apr2g0702 327 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Apr2g0702 327 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0702 Apr-Chr2 8795518 8797237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0702 2 327 NAC Transcription Factor Family AT1G79580 53.543 4.33e-121 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr2g0702 NAM 2.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0702 - - gmx:100789606 587.415