Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0700 ATGGCCGCCACCGCTACCACTGCAGCTGCGCCACGTCAGCTGTCGCAGAAGGAGACGGACATCCAGATGATGCTCGCTGCCGACGTTCACCTCGGCACCAAAAACTGTGACTTTCAAATGGAACGTTACGTCTTCAAGCGCCGCACCGACGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCCATTGAGAACCCTCAAGATATCATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCAGTGCTTAAGTTTGCTCAATACACTGGCACTCATGCGATTGCAGGAAGGCACACGCCCGGAACATTCACCAATCAGTTGCAGACATCCTATAATGAGCCTCGTCTTCTAATTCTGACTGATCCAAGAACAGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATACCAACTATTGCTTTTTGTGACACTGATTCTCCAATGCGATATGTTGACGTTGGGATTCCTGCCAATAATAAGGGGAAGCATAGCATTGGTTGTCTCTTTTGGCTATTAGCTAGGATGGTACTGCAGATGCGGGGAACTATTCGTCCAGGACACAAGTGGGATGTCATGGTGGATTTGTTCTTCTATAGAGAACCCGAGGAGGCCAAGCAACAAGAAGAAGATGAAGCACCAGCTGCCCAAGATTACGCTATTTCGGACTTTAATGCTGCTGGTATTAGCAGCTTCCCTGCTGATGGCCAATGGCCTGCTGCACTTGAACAACCCTGGACTGAAGAAGCTCCACAACCAATCCCAGCAGCTCCTGGTAACTGGGCCCCAGAAGCAACCGTTCCTCTTACAGGAGATTGGGGTGAGTCTGTTCCGGCTCCTCAAGTTGCTGCGGCTCCACAAGTTGTTGCGGCTCCACAAGTTGCTGCGGCTCCACAAGTTGCTGGGCCTCCTGCGGCCCAAACTTTTGCGGCTACCGGCTGGGATTAG 981 0.5036 MAATATTAAAPRQLSQKETDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAGRHTPGTFTNQLQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEEAKQQEEDEAPAAQDYAISDFNAAGISSFPADGQWPAALEQPWTEEAPQPIPAAPGNWAPEATVPLTGDWGESVPAPQVAAAPQVVAAPQVAAAPQVAGPPAAQTFAATGWD* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0700 326 CDD RPS2 24 190 IPR001865 GO:0003735|GO:0005840|GO:0006412
Apr2g0700 326 SUPERFAMILY Ribosomal protein S2 16 206 IPR023591 -
Apr2g0700 326 Gene3D - 20 226 - -
Apr2g0700 326 MobiDBLite consensus disorder prediction 261 285 - -
Apr2g0700 326 Hamap 40S ribosomal protein SA [rps-0]. 8 252 IPR027498 GO:0003735|GO:0006412|GO:0015935
Apr2g0700 326 PANTHER 40S RIBOSOMAL PROTEIN SA 11 270 - -
Apr2g0700 326 ProSitePatterns Ribosomal protein S2 signature 2. 125 149 IPR018130 GO:0003735|GO:0005840|GO:0006412
Apr2g0700 326 TIGRFAM uS2_euk_arch: ribosomal protein uS2 17 212 IPR005707 GO:0003735|GO:0006412|GO:0015935
Apr2g0700 326 PRINTS Ribosomal protein S2 signature 21 39 IPR001865 GO:0003735|GO:0005840|GO:0006412
Apr2g0700 326 PRINTS Ribosomal protein S2 signature 51 60 IPR001865 GO:0003735|GO:0005840|GO:0006412
Apr2g0700 326 PRINTS Ribosomal protein S2 signature 100 117 IPR001865 GO:0003735|GO:0005840|GO:0006412
Apr2g0700 326 PRINTS Ribosomal protein S2 signature 125 142 IPR001865 GO:0003735|GO:0005840|GO:0006412
Apr2g0700 326 PRINTS Ribosomal protein S2 signature 142 153 IPR001865 GO:0003735|GO:0005840|GO:0006412
Apr2g0700 326 PRINTS Ribosomal protein S2 signature 163 177 IPR001865 GO:0003735|GO:0005840|GO:0006412
Apr2g0700 326 PANTHER 40S RIBOSOMAL PROTEIN SA 11 270 IPR005707 GO:0003735|GO:0006412|GO:0015935
Apr2g0700 326 Pfam Ribosomal protein S2 24 119 IPR001865 GO:0003735|GO:0005840|GO:0006412
Apr2g0700 326 Pfam Ribosomal protein S2 121 188 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0700 Apr-Chr2 8754586 8757311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0700 1 269 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 75.277 6.47e-151 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0700 K02998 - gmx:100786575 528.48