Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0699 ATGCCAACTTTGATTTCAACGAGGTTTCTTTTGCTTGTTGGAGAGTCACTTCCCATGAGAAGGGCTTTGGCAACTTCTAGGTCTGTTTTATTGCACACTAGTGTTAATTGTATGAGCCAGGTGGAGCCCCATAATGGTTCCCTCACCCTTTCTAGCATTGGTATCCAAAGTGACACTGAACCCAGAAAGAGAAGCAAATCAAATAAGGTTAAGCCATTGAGTTCACCCTCTGAGACTCTCAAGGGCAAAGGAAAGCCCTTTGGCATTAATGATAAGAAGAAAATTGTTGGTGTTATGAAGAAACAGCAAATAGAGTCTGCCCCTTTTGCCGCAAATTCATTTTCAGAACTTGGACTTCCACGTGTGTTGATTGAGAGGCTAGAAAAGGAGGGTTTCACTGTTCCAACAGAAGTTCAATCTGCTGCAGTTCCCACCATTCTTAAGAACCATGATGTCATAATTCAGTCTTACACAGGTTCGGGGAAGACGTTGGCTTATCTGCTTCCTATACTCTCGGTAGTTGGGCCGCTGAGGGACAAAATTCCTGAAGGCAATGGTGATGGTGGTGAGAGTGGGAAAAAGTTGGGAATAGAAGCAGTGATTGTTGCTCCTTCTAGGGAGCTTGGGATGCAGATAGTGAGGGAGTTTGAGAAGGTACTAGGAATGGATAACAGGAAAGTGGTTCAGCAGCTTGTGGGAGGTGCAAACCGAACCAGGCAGGAAGAAGCTCTCAAGAAAAATAAGCCCGCCATTGTTGTTGGGACGCCTGGTAGGATAGCAGAGCTCAGTGCAGCTGGGAAACTTCGCACTCACGGCTGTCAATATTTGGTGTTAGATGAAGTTGATGAACTCTTGTCGTTCAATTTCCGGGAAGATATGCACCGGATATTGGAGCATGTAGGGAGGAGGTCAGGTTCAGACCCTAACTCAGATTCTGGAAAGGCTGAGCGTCAGTTGATTATGGTTTCTGCCACTGTGCCATTTTCTGTTGTAAGAGCAGCCAGGAGCTGGGGTGGTGACCCACTTCTTGTCAAAGCTAAGAAAGTTGTTCCGCTTGAAGCTGTCTCTCCCTCCGAGCCTGTCAATTTGTCAAGGTCTTCACTCAACTCAAGTCATAGTCCATCTATGCCATCTCAGGCAGCAGTAGAGAGTCTACCTCCTGCATTGAAACACTATTATTGTGTAACAAGGTTGCATCATAAAGTTGATACGTTGAGAAGGTGTATTCATGCACTGGATGCTAAATTTGTTATAGCGTTCATGAACCACACTAAGCAGCTAAAGGATGTTGTCTTCAAGCTGGAGGCCCGTGGGATGAAAGCTGCAGAGTTACATGGAGATCTTGGGAAGCTTGCTAGGTCAACAACTCTGAAGAAATTCAAGAATGGTGAAGTAAGGGTTCTGGTGACAAATGAATTATCGGCAAGGGGTTTGGATGTGGCAGAATGTGATCTTGTGGTTAATCTGGACTTACCTACTGATTCAATTCACTATGCTCACCGAGCCGGTCGAACTGGTCGACTTGGTAGAAATGGTACAGTGCTAACCATATGTGAAGAGCCAGAAGTGTTTGTTGTGAAGAAATTGCAGAGGCAGCTAGGAATACCAATTGCATCGTGTGATTTTGCAGAGGGGAAGCTACTTGTCACTGAAGTAGAGAAAACACTAAGCACTTCTGAAAGATGA 1686 0.452 MPTLISTRFLLLVGESLPMRRALATSRSVLLHTSVNCMSQVEPHNGSLTLSSIGIQSDTEPRKRSKSNKVKPLSSPSETLKGKGKPFGINDKKKIVGVMKKQQIESAPFAANSFSELGLPRVLIERLEKEGFTVPTEVQSAAVPTILKNHDVIIQSYTGSGKTLAYLLPILSVVGPLRDKIPEGNGDGGESGKKLGIEAVIVAPSRELGMQIVREFEKVLGMDNRKVVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLRTHGCQYLVLDEVDELLSFNFREDMHRILEHVGRRSGSDPNSDSGKAERQLIMVSATVPFSVVRAARSWGGDPLLVKAKKVVPLEAVSPSEPVNLSRSSLNSSHSPSMPSQAAVESLPPALKHYYCVTRLHHKVDTLRRCIHALDAKFVIAFMNHTKQLKDVVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKKLQRQLGIPIASCDFAEGKLLVTEVEKTLSTSER* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0699 561 CDD DEADc 123 345 - -
Apr2g0699 561 MobiDBLite consensus disorder prediction 48 86 - -
Apr2g0699 561 SMART ultradead3 131 355 IPR014001 -
Apr2g0699 561 Gene3D - 386 546 IPR027417 -
Apr2g0699 561 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 1 548 - -
Apr2g0699 561 Gene3D - 89 346 IPR027417 -
Apr2g0699 561 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 1 548 - -
Apr2g0699 561 Pfam DEAD/DEAH box helicase 136 330 IPR011545 GO:0003676|GO:0005524
Apr2g0699 561 SMART helicmild6 428 509 IPR001650 -
Apr2g0699 561 MobiDBLite consensus disorder prediction 359 380 - -
Apr2g0699 561 CDD SF2_C_DEAD 389 518 - -
Apr2g0699 561 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 404 548 IPR001650 -
Apr2g0699 561 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 529 IPR027417 -
Apr2g0699 561 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 112 140 IPR014014 GO:0003724
Apr2g0699 561 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 143 344 IPR014001 -
Apr2g0699 561 Pfam Helicase conserved C-terminal domain 404 509 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0699 Apr-Chr2 8746007 8748999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0699 113 537 Eukaryotic Initiation Factors Gene Family AT3G19760 24.178 2.48e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0699 - - gmx:100812968 956.822