Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0685 ATGGCTCCAATGAGTCTCCCACCAGGGTTTAGGTTCCACCCCACAGATGAAGAGCTTGTTGCTTATTACTTAGAAAGGAAAATAACAGGTCGCTCAATAGAACTTGACATCATCGCTGAAGTTGATTTATACAAGTGCGAACCTTGGGATTTGCCAGATAAATCATTCCTTCCAAGCAAAGACATGGAGTGGTATTTTTACAGTCCAAGGGACAGAAAGTACCCAAATGGATCAAGAACAAATAGGGCAACACAAGCTGGGTACTGGAAGGCTACTGGGAAAGATAGGCCAGTGCACTCTCAAAAGAAGCCAGTTGGCATGAAGAAGACATTGGTTTACTACAGAGGTAGAGCACCACATGGGATTAGAACCAACTGGGTTATGCATGAATATCGCTTAATTGAATCAGTGCCTGGTGCTGCTCTCTCATCATTGAAGGACTCCTATTCGTTGTGTCGCATTTTCAAGAAGACAATTCAAGTTCCAACCAAACCTAAAGAAGAACAAATCGAGGATGCAAAGAAGGAATCGCTGTGGATCTCTGAAGAACAAGTGTTAAGGGAAGACTCAAGTGGCACTGAGATTTCTAGAGAAATTGAAACCGTGGATGAGAAAGTTCTCAATCATGAACACCCTAAATTTCCTTGTGACGCTTCTTCTTCTGATCTCACTCAAGGAACATGTACACCCACAGATACCGGTATAGCAGATGATTTTCAACCACAATTTGCTTGTGATGAAGCAAACAGTGCAGCTAATTCATACACAATGGCATTAGGATACCCCACAAATCTATTTCAGGATGTAGAAATCTCTACCTATGCTATGCATTATCAATTCCCATACACACCTTTGGTGCTGGAAGATTTCCCACAAGTAAATTTACCAGAGACAAAGTCAACAAAGTCCGAAATGCCTGATGATGGCATGTTATATGATAGATATAGGGACTGTATGAATGGAACACTAGAAGAGATCATCTCTTTGTGTTGCTCTCAAGATAATTCAGTCCCCTTTCCCATGCTAGAATGA 1032 0.4157 MAPMSLPPGFRFHPTDEELVAYYLERKITGRSIELDIIAEVDLYKCEPWDLPDKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATQAGYWKATGKDRPVHSQKKPVGMKKTLVYYRGRAPHGIRTNWVMHEYRLIESVPGAALSSLKDSYSLCRIFKKTIQVPTKPKEEQIEDAKKESLWISEEQVLREDSSGTEISREIETVDEKVLNHEHPKFPCDASSSDLTQGTCTPTDTGIADDFQPQFACDEANSAANSYTMALGYPTNLFQDVEISTYAMHYQFPYTPLVLEDFPQVNLPETKSTKSEMPDDGMLYDRYRDCMNGTLEEIISLCCSQDNSVPFPMLE* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0685 343 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Apr2g0685 343 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Apr2g0685 343 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Apr2g0685 343 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Apr2g0685 343 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 295 - -
Apr2g0685 343 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0685 Apr-Chr2 8489092 8493023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0685 1 328 NAC Transcription Factor Family AT1G54330 52.410 4.12e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr2g0685 NAM 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0685 - - gmx:100808325 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0685 2 8489092 8493023 Apr2g0685 2 8489092 8493023 ECH