Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0682 ATGGACAGAATGTTCCCTCCCAAGAAGCCCTCAACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGGGACTCGGGTCTTGTCCTCACCACTGACCCAAAGCCTCGCCTTCGTTGGACTGTTGAACTCCATGAACGCTTTGTTGATGCTGTTACTCAGCTTGGAGGGCCTGATAAGGCCACTCCTAAAACAATCATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCACCTCAAGAGCCACCTTCAGAAATTTAGGCTTGGCAAGCAGCCCCACAAGGAATTCAATGATCACTCGATTAAGGATGCTTCGGCTTTAGAACTGCAACGAAACACTGCTTCATCTTCTGCCATGATTGGCCGCAACATGAATGAGATGCAAATAGAGGTGCAGAGAAGATTGCATGAACAACTTGAGGTTCAGAAACACCTTCAGCTAAGGATTGAAGCACAAGGGAAATACATGCAAAGTATATTGGAGAAGGCTTATCAAACACTTGCCGGTGAAAACATGGCATCTGCTGCTACTAACTTAAAGGGTACTATTGGACCTCATCAAGGGATCCCTGACATGGGAGTGATGAAGGAATTTGGTTCCCCTCTTGGTTTTTCTTCTTTTCAAGATCTTGACAATATTTATGGAGGTGACCAAATTGACCTTCAGCAGAACATGGAGAAGCCATCCCTTGATCATGGGTTTATGCCAATTAATGAGAGTTTATGTTTGGGAAAGAAGAGGCCTAACCCTTATAGTGGGAGTGGGAAAAGCCCTTTGATTTGGAGTGATGATCTTAGGCTTCAGGATTTGGGGCCAGCCTCATCATGCCTTGGTCCTCAAGATGACCCTTTCAAAGGTGATCAAATTCAGATTGCACCTCCAGCATCATTAGATAGAGGCACTAGTACCGATATTGATCCCATGTCTGAGATCTATGACTCAAAGCCTGTGCTTCAGGGTGAAGCTGTAGTGGGGGATAAAAAATTCGATCCATCTATGAAGCTTGAAAGGCCATCACCAAGAAGAGCACCTCTTCAGGCTGAAAGGATGAGTCCTATGATCAGTACTGGTACCATGGCCCAAGGTAGAAACTCACCATTTGGGTGA 1110 0.4559 MDRMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASAATNLKGTIGPHQGIPDMGVMKEFGSPLGFSSFQDLDNIYGGDQIDLQQNMEKPSLDHGFMPINESLCLGKKRPNPYSGSGKSPLIWSDDLRLQDLGPASSCLGPQDDPFKGDQIQIAPPASLDRGTSTDIDPMSEIYDSKPVLQGEAVVGDKKFDPSMKLERPSPRRAPLQAERMSPMISTGTMAQGRNSPFG* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0682 369 Gene3D - 34 92 - -
Apr2g0682 369 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Apr2g0682 369 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 318 IPR044848 GO:0003700
Apr2g0682 369 MobiDBLite consensus disorder prediction 1 20 - -
Apr2g0682 369 Pfam MYB-CC type transfactor, LHEQLE motif 128 167 IPR025756 -
Apr2g0682 369 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Apr2g0682 369 MobiDBLite consensus disorder prediction 327 369 - -
Apr2g0682 369 MobiDBLite consensus disorder prediction 352 369 - -
Apr2g0682 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
Apr2g0682 369 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 318 - -
Apr2g0682 369 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Apr2g0682 369 MobiDBLite consensus disorder prediction 328 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0682 Apr-Chr2 8361481 8363723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0682 4 369 G2-like Transcription Factor Family AT1G79430 57.922 3.79e-128 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr2g0682 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0682 - - ccaj:109805894 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0682 2 8361481 8363723 Apr2g0682 2 8361481 8363723 ECH