Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0672 ATGGAATGCGAATATGTTGCATGGAAGCTGCGTGTTGGGTTACAGTTTAACACTCTTGAAGAAGCATGGAAATATTGGATAACAGGATTTGGTGTGAGGAAACAATATTATAATAGGCGAAAGGTTGATGGTGTAATTTCATCTTGTCGGTACGTTTGTTGTAAAGAGGGACATCGAAAGGATGATAAAAGAAATCTAACAGTTACAAAGCACAGGGCAGAAACTAGAACTGATTGTCTTGTAAGAATAACATTGCTTTTGGGATGCAACAACAAATATGTTGTACATGAGTTTGTTGAAGAGCATAATCATCCATTACAACTTCCAGAAACAACACACATGCTTGCTTCGCATCGTAAGATAACTGAAGTCCAAGCTCATCAAATTGATTTGGCCGAGTCCTCAGGATTGCGACAGAAATCATCATTTCAGCTAATGAGCACACTTGCAGGACATCGAGCTAATGTTGGGTATACTCCTCTAGATGCAAAAAATTATTTGAAGAGTAAGAGACAATGGGGAATGTTATATGGAGAAGTCGGTTACTTAATGGAATACTTTCAACGACAGTTAATCGAGAACCCATCATTTTTTCATGCATACCAAATGGATGTTGAGGAACAAATCACAAATGTTTTTTGGGCAGATGCGAAGATGGTCATTGATTACGGGTGTTTTGGTGAAGTCATATCATTAGACACTACATATTGCACCAATCGAGCTAATAGACCTCTAACAGCCGAATCATTTAAGTGGTTGTTTGAGACCTTCTTGGAAGCACACAATCAAAAACAACCTCAAACAATTTTTACAGACCAAGATCAAGCAATGGCCAAGGCAATTGTTCAAGTAATGCCTCACACACATCATGCTTTATGCACATGGCATTTAATGCAAAATGGCATAAAACACCTTGGCAATTTGATGAGAGGAGAAACTCATTTTCTAAGAGATTTGAAAAAATGCATGTATGACTATGATTCTTCAATTGAGTTTGAGGGGGCTTGGAGAAGGTTCATAACAGAATACAATGAGAAATGGGCATCATGTTATCTTAAGGATGTGTTCACCCTTGGAATGCGAAGTACTCAATTAAGTGAAAGTTTAAACTCTGATTTTAAGGCATGTATGAAATCTGGTGTTGACATAAAACAATTCTTTGCTCACTTTGAACGAGTTGTTGAAGATAAGCGTTACAATGAGTTGAAGCATGAGTATGACTCCCGCCACAAGCTAGCTATATTGCAGTATGAGTTTGCTCAATTCTTAGCTTGTAACATATCCCAAAGGTTTGAAACTCCTCCTATAATTGAATATGTGATTACTAAAGTCCATCAACAAAGATCATGGACGGTTACATTTGAACCTTCCTCAAGCACTATATATTGCTCTTGTAAGAAGTTTGAAACATTTGGCATACTTTGCTGTCATGCATCGAAAGTGTTTGAAGCCAATGATGTGAAGGTTATCCCTGATAAATACATACTTAAGAGATGGACAACACAAGGTCGTAGTGAGATTATTCACAATGTCAAAGGAAAAGAGGTAAAAGGAGATCCTAAACTTAGTACCACACGCCGATACCGTAATCTAGCATGTAAAATAATTAGGTTGGCATCCGACGTTTCTAGTTCAGAAGAATATTATCAGCTAGTTGATGATAGTATTAACAACTTAATCAGCAAAATTACAAAACTTCAATTGCAAACAAACAGTCTAATGGATAAAGATAAAGATGATGCAGAATTTATGGCCAATAATGATGGTACACAACCTAAGGGATTCAAGCGACGACCAAGCAGTAAGAGGAAAGGGAGTAAACGTTTCAAAAGTTGGGTTGAGCTACAAGCAAAGAGAAAGAAGAGTAGAACTCCAATTTTAGATCAATCAACGTCTCAGGAATATCAACCAGTGGTTTATGATCCAGTTGAAGAACAACTTCATGATACCAATGATTCAATTCTGGATGATATTTGA 1977 0.3708 MECEYVAWKLRVGLQFNTLEEAWKYWITGFGVRKQYYNRRKVDGVISSCRYVCCKEGHRKDDKRNLTVTKHRAETRTDCLVRITLLLGCNNKYVVHEFVEEHNHPLQLPETTHMLASHRKITEVQAHQIDLAESSGLRQKSSFQLMSTLAGHRANVGYTPLDAKNYLKSKRQWGMLYGEVGYLMEYFQRQLIENPSFFHAYQMDVEEQITNVFWADAKMVIDYGCFGEVISLDTTYCTNRANRPLTAESFKWLFETFLEAHNQKQPQTIFTDQDQAMAKAIVQVMPHTHHALCTWHLMQNGIKHLGNLMRGETHFLRDLKKCMYDYDSSIEFEGAWRRFITEYNEKWASCYLKDVFTLGMRSTQLSESLNSDFKACMKSGVDIKQFFAHFERVVEDKRYNELKHEYDSRHKLAILQYEFAQFLACNISQRFETPPIIEYVITKVHQQRSWTVTFEPSSSTIYCSCKKFETFGILCCHASKVFEANDVKVIPDKYILKRWTTQGRSEIIHNVKGKEVKGDPKLSTTRRYRNLACKIIRLASDVSSSEEYYQLVDDSINNLISKITKLQLQTNSLMDKDKDDAEFMANNDGTQPKGFKRRPSSKRKGSKRFKSWVELQAKRKKSRTPILDQSTSQEYQPVVYDPVEEQLHDTNDSILDDI* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0672 658 Pfam MULE transposase domain 247 300 IPR018289 -
Apr2g0672 658 Pfam SWIM zinc finger 451 484 IPR007527 GO:0008270
Apr2g0672 658 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 10 567 - -
Apr2g0672 658 ProSiteProfiles Zinc finger SWIM-type profile. 450 486 IPR007527 GO:0008270
Apr2g0672 658 SMART 26again6 461 488 IPR006564 GO:0008270
Apr2g0672 658 Pfam FAR1 DNA-binding domain 28 107 IPR004330 -
Apr2g0672 658 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 567 IPR031052 GO:0006355
Apr2g0672 658 MobiDBLite consensus disorder prediction 607 625 - -
Apr2g0672 658 MobiDBLite consensus disorder prediction 582 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0672 Apr-Chr2 8137302 8139749 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr2g0672 FAR1 8.4e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0672 - - aprc:113855580 1335.47