Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0652 ATGAAGAAACATCCTTATAATCCCATGGAACCTAGAAATGAGGAATTCCATCCTCCATCACAGTCAGTCCTGCAAGACCTTCGTGATGGCATGCATATCAATGCACGACCTCCTGCATTTAATATGTCAGAAAATAAGCCTGTACTTAATTACTCCATACAGACTGGTGAGGAATTTGCTCTTGAGTTCATGAGAGATAGGGTGAATCTCAGGAAGCCTTCCTTTCCAAATGTTGTGGGTGATCCCAATTATTCAACAGGCTATATGGAATTGAAAGGCATTTTAGGCCACACAGGATCTGAGAGTGGATCAGATATCTCTGTGCTTGCAAAGGTTGAAAAAGGTCCCAAAGAGTTTGACAGAAGGAACTCTTCTTTACCCCAGGACAGAAGTAATTATGGTTCAGCTCGATCAATTCCTAGAACATCATCTAATCAAGACAAGAACCGAGTCCTTCATGGTACTGCCTCTTCTGGATCATCTGAAAGCTCATCAATGAAGATGAAGGTTCTATGCAGCTTTGGTGGTAGAATATTGCCACGGCCTAGTGATGGAAAGCTTAGATATGCTGGGGGAGAAACGCGTATTATTAGTATAAGAAGGAATATACGTTTTCAGGAGCTTATGCAGAAAACATCATCAATCTATAATGAAGCTCATGTGATAAAGTATCAGCTCCCTGGAGAAGATCTTGATGCCTTAGTTTCAGTATCTTCTGATGAGGATCTGCGAAATATGATGGAGGAATGTCATGATCTACAAAGTGGAAGAGGATCACTAAAGCTTAGGATATTTCTGTTCTCTATGAATGATTTGGATGATACTCAGTTTGGTCTAGGTAGCATTGATGGTGATTCTGAAATCGAGTATGTAGTTGCAGTTAACGGCATGGACATGGGATCCAGAAACAACTCAATACTTCATGGTGCAAGCAGCTCTACAAATAACATGCATGAAATGGATGGACAAAATATTGAGAGGGAGACCAACAGAGTTCTGGTAGACTCATTTGGTGTCAGCGGTTCTTCCTTGACTGGCAATGTTAAATCATCATTGACAATTCAGTCTTCACAACCAATGCTATCAACCTCCTCTAATGCTTATGAAACCTATCCATCATTGTTTTATGATGACCAGATCATTCACCATGGGGAAACTAGTCAATATCCACTTCAGCATGGTCTTGATCCTTCTAATAACTCTGCTCGAAATCTTGGAGAGATTCCAGTTTCTGTTCCGACCCATGGTCTTGTTAACCAAGGAACCATGAATAATGGGCAAGCATCTAGTGAGTTTCAGGTACAAATTTCAGATATGCCAGTGACCATGGTTAAAAGAAAGGGTGATAATTTCGTTCATACAGGAAATGACCCAGGAAAGGTTTTCCCCTTAGAAGCACCATATCCTATTCCTTTGCAGCCATTTGAGGGCAATTTGCAAGGTAATTTATCAGAGGCATCGTCAACAGCTGCTATACTAGAAGGGAATCAGCCTGCACTGCCATCAAAGAACAAGGTTAAGCACCAGCCTTTTGAAGAAGCCACTTCATTGGTTAGTCCTATGAATCCCACACAGACTCCTAAATCTGGTGAAGATAACTTCTATCCACCATCCACTGATGCATCCAGCCACGTTCATGTTGATTCTGAGTCCAGTGTGATTGATTTCAGTTGCCTTGAACCACCTCCACTTCCCAACAGAGTTTATTTTTCAGAGAGAATTCCTAGGGAGCAGGCAGATTTGCTGAACCGATCTACAAAGTCAGATGATGCTCATGGTTCTCACTTACTCATGTCAGATTTACTTTCTGACTTAAACCAGAAGAATTCAGTTACAGAATCCAGTGACATATTGCACAATGGGAATCTGTCAAATCTGAACACTGTGTCCAGCTCAGCAGCAATGCCCTTGCATGCAGATGGCCATTCAATTGATGAAGAATTTTCCCAGCTACAGAAGTACAGACAGTTGCCTGATGCAACAAGTCAGATGAAGCGGGTATTGACAGATAATAAAGTTTCTAGAAATGAGGATCAGGTCCTTAGTTCTGAAAGTGAAGCCAATCGCTCCAAAAGCAACCATAATATTATCCTAGTTGATGAAACCAAAGAACATCTTGCACCTCATCAGGTTCCTCCTGTTGAGCTCAATCAGAATCTAGCATCTAAACTTCCAGACCTCAATTTGGGTGAGGTATCAACCAGAGAATCCAATAACGATACTCAGGTACAAGCTCAGCCTTTTCCTTTAGTTGGAAACATGGGCCAAGATGTTTCTCAAGACTTTCCCCCGGATGTTAAATCCAGACCTGCTCAGGGTGACATTCTGATTGATATTGAGGACAGGTTTCCCCGTGATTTCCTTTATGATATGTTCTCCAAAGCTGCACTTTCTGAAGATTCATCAAATAGTGGTCCCTTACCAACAGATAGAGCAGGTTTGAGCTTAAACATGGACAATCATGAGCCTAAACGTTGGTCATATTTTCAGAAGTTCCATGAGGGGTTTGATAATGTTTCTCTAATTGATCAGGATAATCTTGGTTTTTCATCTGCTGTAAGAAAAGTACAAGTGGGGGATAGTAAATCTCAGCAATCTGCTCCTCTACCAGCAGACAGTGTTTTGGCAGGACCAAAGGAATCCCAACTAAATTTTGGTGAAGAAAATCAGAAAAATGTACCTGTAACAACTAAATCAGAAGCCACTGTTATTCTCCAACAACATGATCATTCCCAAGTAAAGGGCAATGACAGTAAGAATAACGATGCCACAATGGAAAACATAAGACCACAGGAGCCTGAATATCAGGATGGAAAGAATGAAACAAGGAATGTGGGTGTAGCCAGGGAATTTGACATCAGTACTCTGCAGTTCATAAAGAATGAAGATCTTGAAGAGCTGAAAGAACTTGGTTCTGGTACCTTTGGGACGGTGTACCATGGAAAATGGAGGGGATCAGATGTTGCAATAAAAAGAATAAAGAAAAGCTGCTTTGCAGGTCGATCGTCTGAGCAAGAGAGACTGACCATAGAGTTCTGGCGGGAAGCTGACATACTTTCCAAGCTTCACCATCCAAATGTGGTGGCATTTTATGGTGTAGTTAAAGATGGACCAGGAGCAACTTTAGCCACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCAGGTTTTACTTCGTAAGGATAGGTATCTTGATCGCCGCAAGAGGCTGATAATTGCCACGGATGCAGCTTTTGGAATGGAATATTTACACTCAAAAAATATTGTGCATTTTGACTTGAAATGCGATAATTTGCTTGTGAACTTAAAGGATTCTATACGGCCAATATGCAAGGTTGGCGATTTTGGTCTATCAAAAATTAAGCGAAATACCCTGGTGTCTGGTGGTGTGCGTGGAACTCTACCTTGGATGGCACCAGAGCTGCTAAATGGTAGCAGCAATAAGGTTTCAGAAAAGGTTGATGTGTTCTCTTTTGGCATTGTACTATGGGAGATTCTTACTGGTGAAGAGCCATATGCTAATATGCACTATGGTGCAATCATAGGAGGTATTGTGAATAACACATTAAGACCTACAATTCCTAGTTATTGTGATCTAGAATGGAAAACACTAATGGAACAGTGTTGGGCACCTAATCCTTCAGTAAGGCCATCCTTCACTGAAATTGCTCGTCGTTTGCGTGTGATGTCTGCAGCCGCCAGTCAGACCAAAGGACAAGGCCACAAGGCATCTAAATGA 3741 0.4157 MKKHPYNPMEPRNEEFHPPSQSVLQDLRDGMHINARPPAFNMSENKPVLNYSIQTGEEFALEFMRDRVNLRKPSFPNVVGDPNYSTGYMELKGILGHTGSESGSDISVLAKVEKGPKEFDRRNSSLPQDRSNYGSARSIPRTSSNQDKNRVLHGTASSGSSESSSMKMKVLCSFGGRILPRPSDGKLRYAGGETRIISIRRNIRFQELMQKTSSIYNEAHVIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQSGRGSLKLRIFLFSMNDLDDTQFGLGSIDGDSEIEYVVAVNGMDMGSRNNSILHGASSSTNNMHEMDGQNIERETNRVLVDSFGVSGSSLTGNVKSSLTIQSSQPMLSTSSNAYETYPSLFYDDQIIHHGETSQYPLQHGLDPSNNSARNLGEIPVSVPTHGLVNQGTMNNGQASSEFQVQISDMPVTMVKRKGDNFVHTGNDPGKVFPLEAPYPIPLQPFEGNLQGNLSEASSTAAILEGNQPALPSKNKVKHQPFEEATSLVSPMNPTQTPKSGEDNFYPPSTDASSHVHVDSESSVIDFSCLEPPPLPNRVYFSERIPREQADLLNRSTKSDDAHGSHLLMSDLLSDLNQKNSVTESSDILHNGNLSNLNTVSSSAAMPLHADGHSIDEEFSQLQKYRQLPDATSQMKRVLTDNKVSRNEDQVLSSESEANRSKSNHNIILVDETKEHLAPHQVPPVELNQNLASKLPDLNLGEVSTRESNNDTQVQAQPFPLVGNMGQDVSQDFPPDVKSRPAQGDILIDIEDRFPRDFLYDMFSKAALSEDSSNSGPLPTDRAGLSLNMDNHEPKRWSYFQKFHEGFDNVSLIDQDNLGFSSAVRKVQVGDSKSQQSAPLPADSVLAGPKESQLNFGEENQKNVPVTTKSEATVILQQHDHSQVKGNDSKNNDATMENIRPQEPEYQDGKNETRNVGVAREFDISTLQFIKNEDLEELKELGSGTFGTVYHGKWRGSDVAIKRIKKSCFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVKDGPGATLATVTEYMVDGSLRQVLLRKDRYLDRRKRLIIATDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDSIRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWKTLMEQCWAPNPSVRPSFTEIARRLRVMSAAASQTKGQGHKASK* 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0652 1246 MobiDBLite consensus disorder prediction 114 164 - -
Apr2g0652 1246 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 81 1246 - -
Apr2g0652 1246 Gene3D - 186 268 - -
Apr2g0652 1246 Pfam Protein tyrosine and serine/threonine kinase 965 1227 IPR001245 GO:0004672|GO:0006468
Apr2g0652 1246 Pfam PB1 domain 184 267 IPR000270 GO:0005515
Apr2g0652 1246 MobiDBLite consensus disorder prediction 907 927 - -
Apr2g0652 1246 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1089 1101 IPR008271 GO:0004672|GO:0006468
Apr2g0652 1246 SUPERFAMILY Protein kinase-like (PK-like) 955 1226 IPR011009 -
Apr2g0652 1246 SMART PB1_new 182 267 IPR000270 GO:0005515
Apr2g0652 1246 MobiDBLite consensus disorder prediction 517 547 - -
Apr2g0652 1246 CDD STKc_MAP3K-like 970 1227 - -
Apr2g0652 1246 SMART serkin_6 964 1230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0652 1246 ProSiteProfiles Protein kinase domain profile. 964 1229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0652 1246 Gene3D Phosphorylase Kinase; domain 1 958 1051 - -
Apr2g0652 1246 MobiDBLite consensus disorder prediction 670 684 - -
Apr2g0652 1246 ProSitePatterns Protein kinases ATP-binding region signature. 970 995 IPR017441 GO:0005524
Apr2g0652 1246 MobiDBLite consensus disorder prediction 670 693 - -
Apr2g0652 1246 MobiDBLite consensus disorder prediction 907 940 - -
Apr2g0652 1246 PRINTS Tyrosine kinase catalytic domain signature 1046 1059 IPR001245 GO:0004672|GO:0006468
Apr2g0652 1246 PRINTS Tyrosine kinase catalytic domain signature 1083 1101 IPR001245 GO:0004672|GO:0006468
Apr2g0652 1246 PRINTS Tyrosine kinase catalytic domain signature 1154 1176 IPR001245 GO:0004672|GO:0006468
Apr2g0652 1246 PRINTS Tyrosine kinase catalytic domain signature 1198 1220 IPR001245 GO:0004672|GO:0006468
Apr2g0652 1246 CDD PB1_UP2 171 267 - -
Apr2g0652 1246 PANTHER SERINE-THREONINE PROTEIN KINASE 81 1246 - -
Apr2g0652 1246 MobiDBLite consensus disorder prediction 1 21 - -
Apr2g0652 1246 SUPERFAMILY CAD & PB1 domains 183 275 - -
Apr2g0652 1246 Gene3D Transferase(Phosphotransferase) domain 1 1052 1246 - -
Apr2g0652 1246 MobiDBLite consensus disorder prediction 126 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0652 Apr-Chr2 7743284 7751465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0652 9 1156 MAP Kinase Kinase Kinase AT1G79570 43.725 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Apr2g0652 PK_Tyr_Ser-Thr 5.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0652 - - gmx:100799118 2048.09