Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0641 ATGTGTTTGCAAACTACCCCTTCCACTTGTGCTGGGATGAGTTACATGTTAAAGCCAGGGGAGCAATTTGATCATTCAAGTACACTATGGTCACCAAAGGGTAAGTTCTGTCTCAAATTCACAGCTTTTGAGTCTGATCCTAGGCAAACTTATTTAGTCATTCGAATCACACAAAACATTGGATATGTAGATTGGATTGCCAATAGAAATGACCCTGTTGAAAACAATTCTGGGGTCTTAACATTGAACCATTCAGGTGCTTTGACAATTACTAGTGAAGGTGGCAACCCTATAACTTTGTACACACCGGTTCTACCTAGTGAAAAAACTGTTGGTGTCACCCTTTTGGATTCTGGGAACTTAATCCTTGGAGAATATGATGTTAGTGGATATATGAAGCATGTGATGTGGGAAAGCTTTGATCATGCTTCAGATGTGTTGCTACCTGGCATGAAATTAGGTGTTAATTATAAGACTAATAAGTCATGGTCTGTTGTGGCATCAGTTTCTAGTGGTCACCCAAGTATAGGTTGCTTTGAACTTGCATGGGATCCAAAAACACACCAATTGATCATTAAGAGGAGAGGAAAAGTGTATTGGGAAAGTGGGATGCTAAGAAAGAATAGATTTTTTGAGAACATTCCAAAGAAAATACAGCTCATGTATGAGTACAAAATTGTCTCAAATAAGGATGAGGAGTCCTTCAGTTACACAAGTCGCAATGATCAATCCCAGTGGGTTCTGTTTCAGGATGGGAATGTAAAGGATACAGGAATGGATGCTACCATTGTTCATTCTCATTCTTGTTACCACTCCTTCAACACCAAAGATGGTTGCCAAATATCTGATCAACCCAAGTGTAGACATCCCAATGATAAATTTGAAGTTGATTTTGGATATTTTGATCACCAATCCTTTCAAGGAGGATTTTTCATAAAAGACAATGACATCAAATTATTTGAAAGTGATTGTGAAGATACTTGCTGGAACAATTGTAGTTGTGTTGGGTTCACACCTCATTTTCCCAATCAAACTGGGTGTATATATTATTATGGAAATTGGGTGCCAATTAAAGTAAAGGCATCTACATTAAGTATCCACATTCTTGTAAAGGCACGCAAAGAAATGAAGTGGATAAAAATTGGTGTTCCGACAGGATCAGCATTACTCTTAATTAGCTTTGGGATTTTCTGCCTAAGCCATAGGAGAAGAAAAGCAGCAAATCAAGAGAGGAAGAGAAGCAAAATGCATAATGACAAGCTTAATCTCATGGTGTCTGATAGAAGTAATAGTTTTACTGAACTTCAAAATGAAGTGAACAGTGGGAACGATTTAAGAACTCTCAGTTATGAATCAATCATGGCAGCTACAAACAATTTCTCACTACAAAACAAGTTAGGAGGAGGGGGATTTGGACCTGTGTATAAGGGTCTATTACCACAAGGACAAGAAGTAGCAATAAAAAGACTCTCAAAAAATTCAGGACAAGGAGTTGTTGAGTTTAAAAATGAGCTAATACTCATATCTGAACTCCAACACATGAATCTTGTTCAGTTGTTGGGGTGCTGCATTGATGGAGATGAGAGAATGTTAATCTATGAGTACATGCCTAACAAGAGCTTGGACTGCTTTTTATTTGATTCTACTCAAAGCAAAATGCTAGATTGGAGAAAACGTTTCAACATAATTGAAGGAATTGCACAAGGATTACTCTATCTACATAAGTACTCTAGATTGAGAGTAGTTCACAGAGATCTGAAAGCTAGTAACATTCTTCTTGATGCAAATATGAATCCCAAAATTTCAGATTTTGGCATGGCCAGAGTCTTCTCACAAGAAGAATCAAATTTAAACACAAAAAGGATTGTTGGGACATATGGTTACATGTCACCTGAGTATGCCATGGAGGGCATTTTCTCTATCAAATCAGATGTGTATGCTTTTGGAGTCTTACTACTCGAAATTATTAGTGGTAGAAGGAATAGCAGCTTCTACAATGCTGAAAGACCACTCAATCTAGTAGGACATGCTTGGGAGCTATGGAAACAAGGCCAAGGACTAGCTTTATTGGATCCAACTTTGCCAAAATTGTTTATTCAAGATGAAGCATTAAGATGCATTCATGTTGGTCTTCTTTGTGTAGAAGAAAGTGCAGCTGATCGTCCAACCATGTCAGAGATAGTACCCATGTTGACTAGTGAAAGTGCAGCACTTCCATTGCCTAGAAGACCAGCATTTTATCATGGAAGAAATTCTAGTGAGGAGTTTAGTTCCATTAACCACAATGAAACTTATTCGGTGAATGGTTTGACTATTTCCAATGTAGGTGAACGATAA 2337 0.3774 MCLQTTPSTCAGMSYMLKPGEQFDHSSTLWSPKGKFCLKFTAFESDPRQTYLVIRITQNIGYVDWIANRNDPVENNSGVLTLNHSGALTITSEGGNPITLYTPVLPSEKTVGVTLLDSGNLILGEYDVSGYMKHVMWESFDHASDVLLPGMKLGVNYKTNKSWSVVASVSSGHPSIGCFELAWDPKTHQLIIKRRGKVYWESGMLRKNRFFENIPKKIQLMYEYKIVSNKDEESFSYTSRNDQSQWVLFQDGNVKDTGMDATIVHSHSCYHSFNTKDGCQISDQPKCRHPNDKFEVDFGYFDHQSFQGGFFIKDNDIKLFESDCEDTCWNNCSCVGFTPHFPNQTGCIYYYGNWVPIKVKASTLSIHILVKARKEMKWIKIGVPTGSALLLISFGIFCLSHRRRKAANQERKRSKMHNDKLNLMVSDRSNSFTELQNEVNSGNDLRTLSYESIMAATNNFSLQNKLGGGGFGPVYKGLLPQGQEVAIKRLSKNSGQGVVEFKNELILISELQHMNLVQLLGCCIDGDERMLIYEYMPNKSLDCFLFDSTQSKMLDWRKRFNIIEGIAQGLLYLHKYSRLRVVHRDLKASNILLDANMNPKISDFGMARVFSQEESNLNTKRIVGTYGYMSPEYAMEGIFSIKSDVYAFGVLLLEIISGRRNSSFYNAERPLNLVGHAWELWKQGQGLALLDPTLPKLFIQDEALRCIHVGLLCVEESAADRPTMSEIVPMLTSESAALPLPRRPAFYHGRNSSEEFSSINHNETYSVNGLTISNVGER* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0641 778 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 164 IPR036426 -
Apr2g0641 778 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 40 754 - -
Apr2g0641 778 SUPERFAMILY Protein kinase-like (PK-like) 444 766 IPR011009 -
Apr2g0641 778 Pfam D-mannose binding lectin 65 167 IPR001480 -
Apr2g0641 778 PIRSF SRK 259 778 IPR024171 GO:0004674
Apr2g0641 778 PIRSF SRK 1 267 IPR024171 GO:0004674
Apr2g0641 778 Gene3D Phosphorylase Kinase; domain 1 420 535 - -
Apr2g0641 778 ProSiteProfiles Bulb-type lectin domain profile. 14 136 IPR001480 -
Apr2g0641 778 CDD STKc_IRAK 466 732 - -
Apr2g0641 778 Pfam Protein tyrosine and serine/threonine kinase 461 729 IPR001245 GO:0004672|GO:0006468
Apr2g0641 778 Pfam Domain of unknown function (DUF3403) 733 774 IPR021820 GO:0004674
Apr2g0641 778 Gene3D - 10 141 IPR036426 -
Apr2g0641 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Apr2g0641 778 Gene3D Transferase(Phosphotransferase) domain 1 536 738 - -
Apr2g0641 778 SMART blect_4 20 143 IPR001480 -
Apr2g0641 778 ProSiteProfiles Protein kinase domain profile. 460 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0641 778 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 40 754 - -
Apr2g0641 778 SMART serkin_6 460 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0641 Apr-Chr2 7584986 7588620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0641 428 769 Receptor kinase-like Gene Family AT4G11530 56.069 1.99e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr2g0641 PK_Tyr_Ser-Thr 6.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0641 - - aprc:113855562 1598.95