Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0638 ATGGTTTCTGCTACCATGCTATTGTTTTCCACTGATACCCATTCTCTCTCTCTCTCTCCCTCTCCCTCTCCAACCATTCCCAAATCCTTCACTCGCCTCTGCAAACCCTTCCATTCAAGTGTTCCCACTTCTTTCCCCTTCCATTCCACACGACCCACCTTCTTTGTTAGCGCTACTGTCATAAAGTGGAGATGTCCAAAGCAAACTCTCCCTCCCAACTGTGATGCTGGTTTTCAGAAGAAACTCCTGTATCTGGAATCCGTTGGTATTGACTCTTTCTCACTTATTGAAAATCATCCAATGCTGATCACTGTCTCCCTTGCTGACATAAAGTCCACCGTGGAATACATCACCTCAATGGATTTCAGTGCAATTGAGTTTCGGCGTATGGTTGGGATGTGTCCCGAGATTCTTACTACACAAGTCTCAGACATCATACCTGTCTTTACCTTCCTTCATCGCGAGGTTCATGTAAATTGCTCGGATATTAGGCGGGTAATAAACCGTCGTCCCAGGTTGCTTGTCTGCAGTGTTTGTAAGCAACTTCGTCCTACTCTATACTTCCTACAAAGCATTGGCATAGAAGAGGTAAACAAGCACACGGATTTGCTATCATGTAGTGTTGAAGAAAAGTTCATGCCTAGGATTGATTACTTTGAGAATATTGGGTTTTCTCGCCGAGATGCCACTTCAATGTTTCGAAGATTTCCTCAGCTGTTTTGTTATAGTATTAAGAATAATTTGGAGCCTAAATACCATTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGCTGAAAGAATTTCCGCAGTATTTCTCTTTTAGCTTGGAGAATAGAATTAAGCCTAGGCATAAAATGTGTGTAGAAATGGGGGTTTGTTTTCCTCTCCCTGTGCTATTAAAAGCAAGTGAATTGAGATTTCGAAATCGGTTAGACTTATGTGTAAATTCTTCAACACCCTTGAAAACATCTCCTCTATGGTGTGCTGGTTGTGATGTTGAAGTATAG 1011 0.4224 MVSATMLLFSTDTHSLSLSPSPSPTIPKSFTRLCKPFHSSVPTSFPFHSTRPTFFVSATVIKWRCPKQTLPPNCDAGFQKKLLYLESVGIDSFSLIENHPMLITVSLADIKSTVEYITSMDFSAIEFRRMVGMCPEILTTQVSDIIPVFTFLHREVHVNCSDIRRVINRRPRLLVCSVCKQLRPTLYFLQSIGIEEVNKHTDLLSCSVEEKFMPRIDYFENIGFSRRDATSMFRRFPQLFCYSIKNNLEPKYHYFVVEMGRDLKELKEFPQYFSFSLENRIKPRHKMCVEMGVCFPLPVLLKASELRFRNRLDLCVNSSTPLKTSPLWCAGCDVEV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0638 336 Pfam mTERF 73 159 IPR003690 GO:0003690|GO:0006355
Apr2g0638 336 Pfam mTERF 156 308 IPR003690 GO:0003690|GO:0006355
Apr2g0638 336 PANTHER CGI-12 PROTEIN-RELATED 64 322 IPR003690 GO:0003690|GO:0006355
Apr2g0638 336 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Apr2g0638 336 SMART mt_12 164 195 IPR003690 GO:0003690|GO:0006355
Apr2g0638 336 SMART mt_12 196 225 IPR003690 GO:0003690|GO:0006355
Apr2g0638 336 SMART mt_12 263 294 IPR003690 GO:0003690|GO:0006355
Apr2g0638 336 SMART mt_12 230 262 IPR003690 GO:0003690|GO:0006355
Apr2g0638 336 SMART mt_12 93 123 IPR003690 GO:0003690|GO:0006355
Apr2g0638 336 Gene3D Transcription termination factor 3, mitochondrial 142 315 IPR038538 -
Apr2g0638 336 PANTHER OS03G0360600 PROTEIN 64 322 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr2g0638 mTERF 2.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0638 K15032 - gmx:100804440 574.704