Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0624 ATGCAATTGATATTTGACAAATCAGGCTTCTTATACATATTGACAGAAAGAGGGGAGAAGTTTAATATCACCAAGCCAAATGAGGGGATCTCAACTGATGGCTTTTACTACAAAGCAACAATCAATTATGATGGAGTTTTTACCATATCGCAATACCCTAAAGATCCAAAAGATGGACAAAGATGGGTCACTATAAGGACAATACCAGAAAACATTTGTTTGAATTCTACCTTCACAAATGGTGAAGGTGTTTGTGGGTTTAATAGCATATGCACCATTAAAGATGACCAAAGGCCAACATGTAATTGCCCAGAGGGATACTCTCTTATTGATTCATATAACGTGTATGGTGGTTGCATACCGAATTTCCAAGTCATCTGTCAAGAAGGTGGGCATCAATATCCACAAGATGATCAGTACATAATGAAGGAATTAACAAACACTGATTGGCCTAGATCTGATTATGAAACATTAAGTCCTTCTAGTCTACAAGAATGCAAAAAATCTTGTTTGCAAGATTGCTTGTGTGTGTTAGTTACTTTCAATGGAAGTTCTTGTTGGAAAAAGAAGCTCCCACTCACAAATGGGAGAAAAGATCAGGGAGTAAATGGAACTTCAGTCATGAAATTGATGAAATACAATATTTCTCTGGCCTCTTTACCAAACTTACATGCGAAGAAAGATCATGATACTTTAATCATTGTGGTATCAGTTCTTTTGGGTGGCTCCGTCTTTGTTATTTTAACATTAGTTGGTGCAATATGTTTTGGTTTCTCTTGGAATCGCAAGAAAATGACAAGTAATAGAACCAAAAAAAGTTTTGTTGATAGAAATTTGCGCAACTTTACCTTCAAGGAACTTGTAGAAGCAACAGGTAACTTCAGAGAAGAATTAGGAAGGGGATCTTTTAGCATTGTCTACAAAGGAATAATAGAGATGACTAATGTGGCTGTTAAGAAATTAGATAAGTTTGTTCGAGATAATGATAAGGAATTTCAAACAGAAGTGAACGTGATAGGCCAAACTCATCACAGGAACCTAGTTCGTTTGCTTGGATATTGCAATGAAGGACAACATCGGATTCTGGTATATGAGTTTATGAGCAATGGAACTTCAGCAAGCTTCCTTTTCACCCCTTTGAAACCAAATTAATCAAGAGTCCACATTGCTCTTGGAATTGCAAGAGGTCTTGTTTACTTGCATGAGGAATGTTCCACCCAAATCATCCACTGTGACATAAAGCCACAAAATATACTTCTTGATGATCAATATAATGCCAAAATTTCAGATTTTGGGTTAGCAAAGCTATTACTGATTAATCAAAGTCACACTGAAACCGGAATTAGAGGAACAAAAGGGTATGTTGCACCAGAATGGTTTAGAAGTGCACCGGTCACAACTAAGGTTGACACATACAGTTTTGGGGTATTGCTACTAGAGATCATTTGTTGCAGGAAGAATGTAGAAAAAGAGCTTGTTAATGAAGAAAAGGGGATATTAACTGATTGGGCATATGATTGCTACAAAACCAAGAGACTAGAAATGCTTCTTGAAAATGATTATGAGGCTGTAAATGAATTGGTCAGCTTCGAAAAGATTGTCATGATTGCCATTTGGTGCACTCAAGAAGATCCCTCTCTTAGGCCAACAATGAAGAAGGTTTTGCTTATGCTAGAAGGAATTGTTGAAGTTTCTCTTCCCCCAAATCCCTACTTTAATGGTTCAATAAGTCACAATTGA 1740 0.3672 MQLIFDKSGFLYILTERGEKFNITKPNEGISTDGFYYKATINYDGVFTISQYPKDPKDGQRWVTIRTIPENICLNSTFTNGEGVCGFNSICTIKDDQRPTCNCPEGYSLIDSYNVYGGCIPNFQVICQEGGHQYPQDDQYIMKELTNTDWPRSDYETLSPSSLQECKKSCLQDCLCVLVTFNGSSCWKKKLPLTNGRKDQGVNGTSVMKLMKYNISLASLPNLHAKKDHDTLIIVVSVLLGGSVFVILTLVGAICFGFSWNRKKMTSNRTKKSFVDRNLRNFTFKELVEATGNFREELGRGSFSIVYKGIIEMTNVAVKKLDKFVRDNDKEFQTEVNVIGQTHHRNLVRLLGYCNEGQHRILVYEFMSNGTSASFLFTPLKPN*SRVHIALGIARGLVYLHEECSTQIIHCDIKPQNILLDDQYNAKISDFGLAKLLLINQSHTETGIRGTKGYVAPEWFRSAPVTTKVDTYSFGVLLLEIICCRKNVEKELVNEEKGILTDWAYDCYKTKRLEMLLENDYEAVNELVSFEKIVMIAIWCTQEDPSLRPTMKKVLLMLEGIVEVSLPPNPYFNGSISHN* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0624 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Apr2g0624 578 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 578 - -
Apr2g0624 578 SMART serkin_6 292 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0624 578 SUPERFAMILY Protein kinase-like (PK-like) 274 558 IPR011009 -
Apr2g0624 578 Gene3D Phosphorylase Kinase; domain 1 255 366 - -
Apr2g0624 578 Pfam Protein kinase domain 295 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0624 578 Gene3D Transferase(Phosphotransferase) domain 1 367 565 - -
Apr2g0624 578 CDD STKc_IRAK 298 560 - -
Apr2g0624 578 ProSiteProfiles Protein kinase domain profile. 292 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0624 578 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 578 - -
Apr2g0624 578 CDD PAN_AP_plant 123 210 - -
Apr2g0624 578 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0624 Apr-Chr2 7324322 7326063 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0624 234 562 Receptor kinase-like Gene Family AT5G45780 40.000 6.98e-75 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr2g0624 Pkinase 8.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0624 - - aprc:113855555 1170.61