Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0622 ATGAACGATAATGGAAATTTTCAATTGTTAGACCAAAATTTTGCCTCAGTATGGGAGAGTTTCGATCATCCAACTGACACATTGGTGCCTACTCAAGTAATGGAGTTAAATGGCTATCTTTCTTCTCGACAAGGAGAGTTCAACTTCTCAGGTGGAAGGTTCAAACTTCATCTACAAGAGGATGGCAATGCAGTGCTCAACCTTATAAATTTGGCCACCAGGTATAGTTACGAGCCTTACTATGTTATTGGCACTGCTGACGCTGAGAACCAAACAGATGCTGGCATGAAATTGATATTTGACAAATCTGGTTTATTATACGTAGAGAAAAAAAGTGGGGAGAAATTTAATATCACCGAGCCAAATGAGAGGGTCTCTACTGATGACTTCTATTATAGAGCAACTATCAATTACGATGGAGTTTTTACCATATCATATCACCCCAAAGATCCAAAAGATGGACAAGGATGGATCACTGCAGACACTATACCAGAAAATATTTGTTTGAATTCAACGTTCACCAGTGGTGAAGGTGTTTGTGGGTTTAATAGCATATGCACCCTCAATGATAACCAAAGGCCAAAATGTAACTGCCCAGAGGGATATTCTCTTACAGATTCAAATAACATGTATGGTGGATGTATTCCAAATTTCCAAGTTATTTGTCAAGCAGGTGGGCATCGGGGTTCACATGATGATCTATACATAATGAAGGAATTGTCTAACATTGATTGGCCTAAATCTGATTATGAAAGACTAAGTCCTTGTAGTCTACAAGAATGCACAAATTCTTGTTTGCGAGATTGCTTATGTGTGTTAGTTGCTTTCAATGGAAGTACTTGTTTGAAGAAGAAGCTGCCACTTACAAATGGGAGAAGAGATCAGAGACAAAATGGAACTTCTGTCATGAAATTGATGAAAAATGATGATTCTCTCACTTCTTTACCAAATCCAAATGAGAAGAATGATCATGAGGCCTTGATCATTGTAATATCAGTTCTTTTGGGCAGCTCTGTGTTGGTCATCTTAATGTTGGTTGGTACAATATGTTTTGGATTCTCTTGCAATCGCAAGAAAATCCGTAGTAGAACTGGTGGAAGTTTTGTTGACAAAAATTTGCGCAATTTTACCTTCAAGGAACTTGTAGAAGCAACAGGAAATTTTAGAGAAGAATTGGGAAGGGGATCTTTTAGCATTGTGTACAAAGGAACAACAGAGACGACTAGTGTGGCTATTAAAAAATTAGACAAGTTGTCTCAAGATAATGACAATGAATTTCAAACCGAAGTGAATGTGATAGGCCAAACTCATCATAGGAACCTAGTTCGTTTACTTGGATATTGCAATGAAGGACAACATCGGATTCTGGTATATGAATTTATGAGTAATGGAACTTTGGCAAACTTCCTTTTCACCCCTTTGAAACCAAACTGGAATCAACGGTTCCACATTGCCCTTGGGATTGCAAGAGGTCTTGTTTACTTGCATGAGGAATGTTCCACCCAAATCATCCATTGTGACATAAAGCCACAAAATATACTTCTTGATGATCAATATAATGCCAGAATTTCGGATTTTGGGTTAGCAAAGTTATTATTGATTAATCAGAGCCACACTGAAACTAGAATTAGAGGCACCAAAGGGTATGTTGCACCGGATTGGTTTAGAAGTGCACCAATCACTGCTAAAGTTGACACTTACAGTTTTGGTGTGATGTTACTAGAGATTATTTGCTGTAGGAGGAATGTAGAAAAGGAGTTTGTTGATGAAGATAAAGGGATATTAACTGATTGGGTCTATGATTGCTATAAGACTAAAAGACTAGACATCCTTCTAGAAAATGATTTTGAAGCTATCAATGCAATGAAAAGCTTCGAAAAACTTGTCATGATTGCTATTTGGTGCATTCAAGAAGATCCTTCTCTTAGGCCGACAATGAAGAGGGTTTTGTTGATGCTAGAAGGAATTATTGAAGTTTCAATGCCTCCAAATCCCTACCTTCACAGTTCTAGACTCTTCCACATGGTTCGCCCAACATTGTTCTTTCCATTTTTGTTATCGCTACTTCATATATCCGTATCAGGTGTGGTTTCAAATAAATCCATCACTCTGGTTAACCAATGCAACTACACAGTGTGGCCAGCTTCATATGCGTTCAGGGGAAGCGCCGGTCTTTCAACCACCGGCTTCACTTTAAAAGCGGGCGAGTCTTCCACCGTAACGGCACCAGACACATGGAACGGCCGTTTCTGGTGCCGCACACTCTGCACCACCGACTCCGCCACCGGAAATTACTCCTGCGCAACCGGCGATTGCAACTCCGGCCAGGTGTCCTGCGGCGGCAACCCACCCAAGCTTCCTGCCACGGCGGCAATGTTCAATTTAAGCGCAGACGGCGTTGATTTCTTTGGTATCGACTTGACACACGGCTACAACGTTCCAATGCAAGTGGTTCCGTTTGCGGGTTGGAACGGTAACTGCAGAAGCATGAGTTGCATTTCCACTGCAGATTTGAATGCCACGTGTCCCCCGGAACTAAAGGTTGTTACTGATAAGGGAGTAGTGGTTGGGTGCCAAAGCGCGTGCGGCGCGTTCAAGTCGGCGCAGTATTGCTGCAGTGGCGATTCTTCCACAAAGAACACTTGCAATGCTACTAATTACTCTCTTATCTTCAAGAGGGCATGCCCAGAAGCTCTGACCTACTGGTTTGATGATAGATCCGACAATTTTACATGTTCATCATCAACAAATGCAGGTTTCAACGTCATCTTTTGTCCCGCAGATAACTCCAGCTTAGGATCGCTAGCCAAGAGTGTCAGAGTTGGTGATTCACTTACTGCTAGCAATGGGGGCAATGGGACGACTGGGTGGCTATCTCCTTCAGGCGATTTTGCATTTGGGTTTTACCAACTTCCTAATATGGTTTTCTTGTTGGCTGTATGGTATGACAAGATACCTAACAAGACTATCATTTGGTATGCAAATGGTGACAACCCTGCTCCTATAGGATCAAGATTGGAACTAACTGACTCCCTTGGGCTAGTGCTTAGGAACCCTCAAGGTTCAGAGTTATGGAAATCAGGTTCTACATCAAGTACAATTTATAATGGTCTAATGAATGATAGTGGAAATTTTCAACTGTTAGACCAAAATTTTGTGCCATTATGGGATAGTTTTAATCATCCAACTGACACATTGCTGCCTACTCAAGTAATGAACTTAAATGGCTATCTTTCTTCTCGACAAGGAGAATTCAACTTCTCGCGTGGAAGGTTCAAACTTCTTCTACAACAAGATGGCAATCTTGTACTCAACCTTGTAAATTTGTCTAACAACAATAGTTATAAGCCTTACTATGACACACAAACTGCAGATAGTAAGAATCAAACAAATGTTGGCATGCAATTGATATTTGACAAATCAGGCTACTTATACGTACTAAAAAAATCTGGGGAGAAGTTTAAAATATCTGAGCCAGATGAGAAGGTCTCAATTGATGATTTCTATTATAAAGCAACAATAAATTATGATGGAGTTTTTGCCATATCAAGTTACCCAAAAGATCCAAGCATTGGAACAAGATGGGTCACTAGAAAAGCTATGCCAGAAAATATTTGTTTGACTTCTATATCCCCAAGTGGTGATGGTGTTTGTGGGTTGAATAGTATTTGCACCCTCAATGATGACCAAAGGCCAATATGTAACTGCCCAGAGGGATATTCTCTTAAGCATTCAGATAACATGTATGGTGACTGCAGCCCAAATTTTCAAAACACTTGTCAAGCTGATGGACCTCAGAGGTCGTATGATGATCTATACATAATGAAGGAATTACCAAACATTGATTGGCCTAAATCTGATTATGAAACACTAAGACCTTCTAGTCTACAAGATTGCATGAAGTCTTGTTTGCAAGATTGTTTGTGTGTTTTGGTTACTTTTGAAGGAAGTTCTTGTTGGAAGAAGAAGCTGCCACTCAAGAATGGGAGAAAAGATGAGGGAGTAAATGGAACTTCTATCATGAAGTTGATGAAAAATAATGAAACTTCCCCCTCTTCCCCAAAAGATCACAATACAATCACCTCTTACCCAAAAGATCACAATACATTGATCATTGTGATATCGGTTCTTATGGGTGGCTCTGTTTTGGTCATTATAATGTTGGTTGGTTCAATATGTTTCTGTTTCTCATGCAAACCCAAGGAGATCAAAACAAGGAGCACCAACACAATTGCTGTTGATAGAAATTTGCGCAATTTCACCTTCGAAGAACTTGTGGAAGCAACAAGCAACTTCACAGAAGAATTGGGAAGGGGATCTTTCAGCATTGTCTACAAAGGAACTATAGACATTGCTAGTGTGGCTGTCAAGAAATTAAATAAGTTGTTCCAAGAAATTGATGAGGACTTCCAAACTGAAGTGAATGTGATAGGCCAAACACATCACAGGAACCTAGTTCGTTTACTTGGATATTGCAATGAAGGACAACATCGGATTCTGGTATATGAATTTATGAGCAATGGAACTTTAGCAAGCTTCCTTTTCACTCCTTTGAAACCAGGTTGGAATCAACGATTCCAAATTGCCCTTGGGATTGCAAGAGGTCTTATTTACTTGCATGAGGAATGTTGCACCCAGATTATCCATTGTGACATCAAGCCACAAAATATACTTCTAGATGATCAATACAATGCCAGAATTTCTGATTTTGGGTTAGCAAAGCTATTGTTGATTAGTGAAAGTCACACTGAAACAAGAATTAGAGGAACAAAAGGGTATGTTGCACCTGATTGGTTTAGGAGTGTACCAATCACTGCTAAGGTTGACACTTATAGTTTTGGTGTACTGTTACTGGAGATCATTTGCTGTAGAAAAAATGTAGAAAAGGAGCTTCTTAGTGAAGAAAAAGGGATTTTAACTGATTGGGCATATGATTGCTACAAGACTAAAACACTAGATGCTCTTTTTGAGAATGATCGTGAGTTTATCAATAACATGGAGAGCTTTGAAAAGCTTGTCATGATTGCTTTTTGGTGCACACAAGAAAATCCTTCCGTTAGGCCAAACATGAAGAAGGTTTTGCTGATGCTAGAAGGAATTGTTGAAGTTCCAATGCCCCCAAATCCCTGCCTTCATGGTTCTGACTATTAA 5151 0.3984 MNDNGNFQLLDQNFASVWESFDHPTDTLVPTQVMELNGYLSSRQGEFNFSGGRFKLHLQEDGNAVLNLINLATRYSYEPYYVIGTADAENQTDAGMKLIFDKSGLLYVEKKSGEKFNITEPNERVSTDDFYYRATINYDGVFTISYHPKDPKDGQGWITADTIPENICLNSTFTSGEGVCGFNSICTLNDNQRPKCNCPEGYSLTDSNNMYGGCIPNFQVICQAGGHRGSHDDLYIMKELSNIDWPKSDYERLSPCSLQECTNSCLRDCLCVLVAFNGSTCLKKKLPLTNGRRDQRQNGTSVMKLMKNDDSLTSLPNPNEKNDHEALIIVISVLLGSSVLVILMLVGTICFGFSCNRKKIRSRTGGSFVDKNLRNFTFKELVEATGNFREELGRGSFSIVYKGTTETTSVAIKKLDKLSQDNDNEFQTEVNVIGQTHHRNLVRLLGYCNEGQHRILVYEFMSNGTLANFLFTPLKPNWNQRFHIALGIARGLVYLHEECSTQIIHCDIKPQNILLDDQYNARISDFGLAKLLLINQSHTETRIRGTKGYVAPDWFRSAPITAKVDTYSFGVMLLEIICCRRNVEKEFVDEDKGILTDWVYDCYKTKRLDILLENDFEAINAMKSFEKLVMIAIWCIQEDPSLRPTMKRVLLMLEGIIEVSMPPNPYLHSSRLFHMVRPTLFFPFLLSLLHISVSGVVSNKSITLVNQCNYTVWPASYAFRGSAGLSTTGFTLKAGESSTVTAPDTWNGRFWCRTLCTTDSATGNYSCATGDCNSGQVSCGGNPPKLPATAAMFNLSADGVDFFGIDLTHGYNVPMQVVPFAGWNGNCRSMSCISTADLNATCPPELKVVTDKGVVVGCQSACGAFKSAQYCCSGDSSTKNTCNATNYSLIFKRACPEALTYWFDDRSDNFTCSSSTNAGFNVIFCPADNSSLGSLAKSVRVGDSLTASNGGNGTTGWLSPSGDFAFGFYQLPNMVFLLAVWYDKIPNKTIIWYANGDNPAPIGSRLELTDSLGLVLRNPQGSELWKSGSTSSTIYNGLMNDSGNFQLLDQNFVPLWDSFNHPTDTLLPTQVMNLNGYLSSRQGEFNFSRGRFKLLLQQDGNLVLNLVNLSNNNSYKPYYDTQTADSKNQTNVGMQLIFDKSGYLYVLKKSGEKFKISEPDEKVSIDDFYYKATINYDGVFAISSYPKDPSIGTRWVTRKAMPENICLTSISPSGDGVCGLNSICTLNDDQRPICNCPEGYSLKHSDNMYGDCSPNFQNTCQADGPQRSYDDLYIMKELPNIDWPKSDYETLRPSSLQDCMKSCLQDCLCVLVTFEGSSCWKKKLPLKNGRKDEGVNGTSIMKLMKNNETSPSSPKDHNTITSYPKDHNTLIIVISVLMGGSVLVIIMLVGSICFCFSCKPKEIKTRSTNTIAVDRNLRNFTFEELVEATSNFTEELGRGSFSIVYKGTIDIASVAVKKLNKLFQEIDEDFQTEVNVIGQTHHRNLVRLLGYCNEGQHRILVYEFMSNGTLASFLFTPLKPGWNQRFQIALGIARGLIYLHEECCTQIIHCDIKPQNILLDDQYNARISDFGLAKLLLISESHTETRIRGTKGYVAPDWFRSVPITAKVDTYSFGVLLLEIICCRKNVEKELLSEEKGILTDWAYDCYKTKTLDALFENDREFINNMESFEKLVMIAFWCTQENPSVRPNMKKVLLMLEGIVEVPMPPNPCLHGSDY* 1717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0622 1716 Gene3D Phosphorylase Kinase; domain 1 1395 1504 - -
Apr2g0622 1716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1547 1559 IPR008271 GO:0004672|GO:0006468
Apr2g0622 1716 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 79 IPR036426 -
Apr2g0622 1716 Pfam Thaumatin family 706 926 IPR001938 -
Apr2g0622 1716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Apr2g0622 1716 SMART tha2 702 926 IPR001938 -
Apr2g0622 1716 SUPERFAMILY alpha-D-mannose-specific plant lectins 985 1123 IPR036426 -
Apr2g0622 1716 ProSitePatterns Protein kinases ATP-binding region signature. 392 414 IPR017441 GO:0005524
Apr2g0622 1716 CDD B_lectin 958 1062 IPR001480 -
Apr2g0622 1716 Gene3D Transferase(Phosphotransferase) domain 1 1505 1704 - -
Apr2g0622 1716 Gene3D Transferase(Phosphotransferase) domain 1 461 662 - -
Apr2g0622 1716 SUPERFAMILY Protein kinase-like (PK-like) 370 654 IPR011009 -
Apr2g0622 1716 ProSiteProfiles Protein kinase domain profile. 1430 1701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0622 1716 Gene3D - 24 160 IPR036426 -
Apr2g0622 1716 Gene3D - 1063 1200 IPR036426 -
Apr2g0622 1716 ProSitePatterns Protein kinases ATP-binding region signature. 1436 1458 IPR017441 GO:0005524
Apr2g0622 1716 CDD STKc_IRAK 392 656 - -
Apr2g0622 1716 Gene3D Phosphorylase Kinase; domain 1 368 460 - -
Apr2g0622 1716 ProSiteProfiles Protein kinase domain profile. 386 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0622 1716 SUPERFAMILY Osmotin, thaumatin-like protein 702 927 IPR037176 -
Apr2g0622 1716 ProSiteProfiles Thaumatin family profile. 699 926 IPR001938 -
Apr2g0622 1716 CDD TLP-PA 701 925 - -
Apr2g0622 1716 SMART egf_5 167 215 IPR000742 -
Apr2g0622 1716 SMART egf_5 1205 1253 IPR000742 -
Apr2g0622 1716 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 670 - -
Apr2g0622 1716 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 847 1714 - -
Apr2g0622 1716 Pfam D-mannose binding lectin 989 1075 IPR001480 -
Apr2g0622 1716 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 670 - -
Apr2g0622 1716 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 847 1714 - -
Apr2g0622 1716 CDD STKc_IRAK 1436 1700 - -
Apr2g0622 1716 SMART blect_4 948 1062 IPR001480 -
Apr2g0622 1716 Pfam Protein kinase domain 1433 1694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0622 1716 Pfam Protein kinase domain 389 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0622 1716 SUPERFAMILY Protein kinase-like (PK-like) 1413 1698 IPR011009 -
Apr2g0622 1716 Gene3D - 937 1061 IPR036426 -
Apr2g0622 1716 PRINTS Pathogenesis-related protein signature 701 713 IPR001938 -
Apr2g0622 1716 PRINTS Pathogenesis-related protein signature 749 760 IPR001938 -
Apr2g0622 1716 PRINTS Pathogenesis-related protein signature 801 817 IPR001938 -
Apr2g0622 1716 PRINTS Pathogenesis-related protein signature 916 925 IPR001938 -
Apr2g0622 1716 SMART serkin_6 1430 1697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0622 1716 SMART serkin_6 386 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0622 1716 Gene3D Thaumatin 701 926 IPR037176 -
Apr2g0622 1716 ProSiteProfiles Bulb-type lectin domain profile. 942 1060 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0622 Apr-Chr2 7284842 7305869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0622 372 655 Receptor kinase-like Gene Family AT1G60800 41.781 9.71e-67 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr2g0622 Pkinase 3.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0622 - - aprc:113853791 3488.74