Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0608 ATGGTGAAGTTCACAGCTGAAGAGCTACGTCGTATTATGGACTATAAGCACAATATCCGTAATATGTCTGTCATTGCTCATGTTGATCATGATTCTCTCGTAGCTGCTGCTGGCATTATTGCACAAGAAGTTGCAGGTGATGTCCGAATGACTGATACTCGTGCGGATGAAGCTGAGCGTGGTATAACAATAAAGTCTACGGGTATCTCACTTTACTATGAAATGCCTGATGAATCTCTCAAGAGTTTTAAGGGAGACCGCCAAGGGAATGAGTATCTCATCAATCTTATTGACTCCCCTGGGCATGTTGATTTCTCATCGGAGGTTACTGCTGCACTTCGAATTACTGATGGAGCTCTAGTGGTGGTGGATTGTGTTGAAGGTGTCTGTGTCCAAACTGAAACTGTGCTACGACAAGCCCTGGGAGAAAGGATTAGGCCTGTTCTGACTGTTAACAAGATGGACAGATGCTTCCTTGAGCTCCAGGTGGATGGAGAGGAAGCTTATCAGACATTTCAAAGGGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAAGATCCACTACTTGGTGATGTTCAGGTCTATCCAGAGAAAGGAACAGTTGCTTTTTCTGCAGGTTTGCATGGCTGGGCGTTTACCTTGACTAACTTTGCCAAGATGTATGCATCCAAGTTTGGAGTTGATGAGTCAAAGATGATGGAAAGGCTCTGGGGTGAAAACTTTTTTGATCCAGCCACCAAGAAATGGACTAACAAGAATACTGGTTCTGCTACCTGCAAGCGTGGGTTTGTTCAGTTCTGTTATGAACCTATCAAGCAGATCATTAACACTTGTATGAATGACCAGAAGGATAAGCTATGGCCTATGCTTCAAAAGCTTGGAGTCACCATGAAATCTGAGGAGAAGGACCTCATGGGGAAAGCATTGATGAAGCGTGTCATGCAAACCTGGCTCCCAGCAAGTAGTGCTCTCTTGGAAATGATGATATTTCATCTTCCGTCTCCGGCAAAGGCCCAGAAGTATCGTGTAGAGAATTTGTATGAGGGTCCCATGGATGATCAGTATGCTTCTGCTATCAGAAATTGTGATCCTGAAGGACCTCTGATGCTCTACGTCTCCAAGATGATTCCTGCATCTGACAAGGGTAGGTTTTTTGCTTTTGGCCGTGTGTTCTCTGGCAGGGTTTCAACTGGTTTAAAGGTCAGGATTATGGGACCAAATTATGTCCCTGGGGAGAAAAAGGACTTGTATGTTAAAAGTGTTCAGCGAACTGTGATTTGGATGGGAAAGAGACAGGAAACTGTAGAGGATGTCCCTTGTGGTAACACAGTTGCTATGGTTGGTTTAGATCAATTTATCACTAAGAATGCTACATTGACTAATGAGAAGGAAGTTGATGCCCACCCTATTCGAGCTATGAAGTTTTCTGTCTCACCTGTTGTCCGTGTTGCTGTTCAGTGTAAGGTGGCATCAGATCTTCCTAAGCTTGTTGAAGGTCTTAAACGTTTGGCCAAGTCAGATCCTATGGTTGTTTGTACTATTGAGGAGTCTGGTGAGCACATTGTTGCTGGTGCAGGAGAGCTTCATCTAGAGATCTGTTTGAAAGACTTGCAGGAAGATTTCATGGGTGGAGCTGAGATTATTAAATCTGACCCTGTTGTGTCATTCAGGGAGACTGTCCTTGAGAGATCTTGCCGCACTGTGATGAGTAAGTCACCCAACAAGCACAATCGTCTATACATGGAAGCAAGACCAATGGAGGATGGGCTTGCAGAGGCCATTGATGAGGGCAAGATTGGACCAAGGGATGACCCCAAAGTTCGTTCTAAAATCTTGTCAGAAGAATTTGGTTGGGATAAGGACCTTGCCAAGAAAATCTGGTGCTTTGGACCTGAGACCATTGGACCCAACATGGTGGTTGATATGTGTAAGGGAGTCCAGTATTTAAATGAAATCAAGGATTCCGTAGTTGCTGGTTTCCAGTGGGCATCAAAAGAAGGTGCATTGGCTGAAGAAAACATGAGAGCCATATGTTTTGAAGTATGTGATGTTGTCCTGCATGCTGATGCTATCCACAGAGGAGGTGGTCAGATCATTCCTACTGCTAGGAGAGTCTTCTATGCTTCCCAGTTGACTGCCAAGCCAAGGCTTCTCGAGCCTGTTTACCTGGTCGAAATCCAGGCTCCTGAACAAGCTCTTGGTGGTATCTACAGTGTTCTTAACCAGAAACGTGGACATGTCTTTGAGGAAATGCAGAGGCCGGGTACCCCGCTTTACAACATCAAAGCTTACCTTCCTGTCATTGAATCTTTTGGGTTCTCAAGCACATTGAGGGCTGCAACATCAGGGCAGGCTTTTCCACAGTGTGTGTTCGATCACTGGGATATGATGTCCTCAGATCCATTGGAGGCTGGTTCACAAGCTGCACAGCTTGTTTCTGACATTCGCAAGAGGAAGGGCTTGAAGGAGCAGATGACTCCACTCTCCGAGTATGAAGACAAGCTTTAA 2514 0.4503 MVKFTAEELRRIMDYKHNIRNMSVIAHVDHDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMPDESLKSFKGDRQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTNKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPAKAQKYRVENLYEGPMDDQYASAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEDGLAEAIDEGKIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRAICFEVCDVVLHADAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEAGSQAAQLVSDIRKRKGLKEQMTPLSEYEDKL* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0608 837 SUPERFAMILY EF-G C-terminal domain-like 478 554 IPR035647 -
Apr2g0608 837 SUPERFAMILY EF-G C-terminal domain-like 721 832 IPR035647 -
Apr2g0608 837 SMART EFG_C_a 718 807 IPR000640 -
Apr2g0608 837 Pfam Elongation Factor G, domain III 481 543 IPR041095 -
Apr2g0608 837 SUPERFAMILY Translation proteins 336 470 IPR009000 -
Apr2g0608 837 SUPERFAMILY Ribosomal protein S5 domain 2-like 556 720 IPR020568 -
Apr2g0608 837 PRINTS GTP-binding elongation factor signature 21 34 IPR000795 GO:0003924|GO:0005525
Apr2g0608 837 PRINTS GTP-binding elongation factor signature 59 67 IPR000795 GO:0003924|GO:0005525
Apr2g0608 837 PRINTS GTP-binding elongation factor signature 95 105 IPR000795 GO:0003924|GO:0005525
Apr2g0608 837 PRINTS GTP-binding elongation factor signature 111 122 IPR000795 GO:0003924|GO:0005525
Apr2g0608 837 PRINTS GTP-binding elongation factor signature 147 156 IPR000795 GO:0003924|GO:0005525
Apr2g0608 837 Gene3D - 564 716 IPR014721 -
Apr2g0608 837 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 17 338 IPR000795 GO:0003924|GO:0005525
Apr2g0608 837 CDD EF2_snRNP_III 481 553 - -
Apr2g0608 837 CDD eEF2_snRNP_like_C 721 799 - -
Apr2g0608 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 335 IPR027417 -
Apr2g0608 837 Gene3D - 717 837 - -
Apr2g0608 837 Pfam Elongation factor G, domain IV 604 716 IPR005517 GO:0005525
Apr2g0608 837 Gene3D Elongation Factor G (Translational Gtpase), domain 3 480 557 - -
Apr2g0608 837 Gene3D - 3 231 IPR027417 -
Apr2g0608 837 CDD EF2_II 369 464 - -
Apr2g0608 837 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 836 - -
Apr2g0608 837 CDD aeEF2_snRNP_like_IV 553 725 - -
Apr2g0608 837 Pfam Elongation factor G C-terminus 718 805 IPR000640 -
Apr2g0608 837 Gene3D Translation factors 337 478 - -
Apr2g0608 837 CDD EF2 20 224 - -
Apr2g0608 837 Pfam Elongation factor Tu GTP binding domain 17 336 IPR000795 GO:0003924|GO:0005525
Apr2g0608 837 Pfam Elongation factor Tu domain 2 388 461 IPR004161 GO:0005525
Apr2g0608 837 PANTHER - 1 836 - -
Apr2g0608 837 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 IPR031157 -
Apr2g0608 837 SMART EFG_IV_2 599 716 IPR005517 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0608 Apr-Chr2 7123078 7128550 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0608 1 837 Eukaryotic Initiation Factors Gene Family AT1G56070 92.052 0.0 1633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0608 K03234 - gmx:100804251 1643.63