Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0576 ATGCCTTGTTTTCCTTTCTTATTCTGTAAGGTGTCTTCTTCAGCAAAACAAGAACAAGAAACTGATGAAGATATTTCAGGCATTCATAATGTTAGGCTCTACACCTACAAAGAACTAAGAAATGCCACTGAGGAATTTAGTCCGGCCAATAAAATTGGAGAGGGTGGTTTTGGCTCTGTTTACAAGGGACGGCTTAAAAATGGAAAATATGCTGCAATAAAAGTTCTTGCACCTGAATCAAGGCAAGGGGTGAAGGAGTTCTTGACAGAGATTAATGTGATCTCAGAGATAGAGCATGAAAATTTGGTCAAGTTATATGGTTGTTGTGTGGAAAAGAATAACAGAATATTAGTCTACAATTACCTTGAGAATAACAGCCTTGCACAAACTCTTCTAGGAGGTCACCATAGTAGTCTGTACTTTGATTGGCAAACACGGTGTAGAATATGCATTGGTGTTGCACGTGGGCTTGCCTTCCTTCATGAAGAAGTAAGGCCTCATATTGTTCATAGGGATATAAAAGCAAGCAATATCCTCCTTGACAAAGATCTTACACCCAAGATTTCAGATTTTGGACTTGCAAAGCTTATTCCAGCAAACATGACTCACGTCAGCACACGTGTAGCAGGAACAATAGGCTATTTGGCACCAGAGTATGCAATAGGGGGGAGGCTGACACGGAAAGCAGACATTTACAGCTTTGGTGTCCTTCTTGTGGAGATAGTCAGTGGAAGATGTAACACGAATTCACGACTACCAATAGAAGAACAATTTATTCTAGAGAGGACATGGCATCTTTATGAGCGAAAGGAATTGGTAGAGCTGGTGGACACATCACTAAACGGAGAATTTGATGCCGAGCAGGCCTGTATGTTTCTAAAGATTGGCCTTCTTTGCACTCAGGACTCTCCAAAGCTCCGGCCATCAATGTCTTCTGTGGTCAAGATGCTCACTGGAAAAATGGATGTTGATTACTCTAAGATAACAAAACCTGCCTTAATTTCTGATTTTATGGACCTCAAAGTTAGAAGTAAACAAGAAAGTTATACTGATACAAAGAATTTATCTACATACAATACATCATCCTCCTCAGACAACCACGATACTACCATGTCATCCACTGTAACTACAACCTTCACTGCAAAATATGATCAAAGCATGTAA 1164 0.4003 MPCFPFLFCKVSSSAKQEQETDEDISGIHNVRLYTYKELRNATEEFSPANKIGEGGFGSVYKGRLKNGKYAAIKVLAPESRQGVKEFLTEINVISEIEHENLVKLYGCCVEKNNRILVYNYLENNSLAQTLLGGHHSSLYFDWQTRCRICIGVARGLAFLHEEVRPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIGGRLTRKADIYSFGVLLVEIVSGRCNTNSRLPIEEQFILERTWHLYERKELVELVDTSLNGEFDAEQACMFLKIGLLCTQDSPKLRPSMSSVVKMLTGKMDVDYSKITKPALISDFMDLKVRSKQESYTDTKNLSTYNTSSSSDNHDTTMSSTVTTTFTAKYDQSM* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0576 387 Gene3D Transferase(Phosphotransferase) domain 1 122 333 - -
Apr2g0576 387 SMART serkin_6 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0576 387 Pfam Protein kinase domain 49 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0576 387 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 377 - -
Apr2g0576 387 ProSiteProfiles Protein kinase domain profile. 46 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0576 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Apr2g0576 387 Gene3D Phosphorylase Kinase; domain 1 14 121 - -
Apr2g0576 387 MobiDBLite consensus disorder prediction 351 372 - -
Apr2g0576 387 CDD STKc_IRAK 52 319 - -
Apr2g0576 387 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Apr2g0576 387 PANTHER - 3 377 - -
Apr2g0576 387 SUPERFAMILY Protein kinase-like (PK-like) 29 340 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0576 Apr-Chr2 6806553 6811980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0576 17 371 Receptor kinase-like Gene Family AT1G53430 50.140 2.71e-111 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr2g0576 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0576 - - gmx:100782320 641.343