Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0561 ATGGCATCATTCCAAAGTTTCAACTTTGAAGCTCAGATTCCAGCAGAGCTCCTAATAGCTCAGATCATGCAACTTCATGCAAGCATTTCAAAGCTTGAATCTCTTAGGCCTTCTAAGCAAGTTAATAGCCTTTTCACTCACCTAGTGAACCTTTGTACCCTCCCTTCATCCATTGACATTGAAGCCTTACCCCAAGAGGTGAAAATAATGCGTGAGAACCTCATTAAGCTTTGTGGCCATGCTGAAGGGCTTTTAGAGCTTGAATTCTCAACATTCATAAGCCTCACACCCAAGCCATTGAACAATCTAACCTTGTTCCCTTACTATGGGAACTATGTGAAACTAGCAAACTTGGAGAACAAAATCCTCGAAGAAAATGGGGTGGTGAATTCAAAGAAGGTAGCCTTTGTAGGGTCAGGTCCAATGCCACTCACTTCCATCATTATGGCCACTCATCACATGGAATCTACCCACTTTGATAACTTTGATATTGATGAGAAGGCAAATGAGATGGCTCGCAAGATTGTTGCTTCTGATGCAACACTTGAGAGGAGGATGAAGTTTGAAACACAAGACATTATGGAAGTGAGAGAGAGGTTGGGACAATATGATTGCATCTTTTTGGCAGCACTTGTGGGTATGAGTAGAGAAGCAAAAAATAAGATTTTGGGACACATAAGAAGGTATATGAAAGAGGGAGGGGTTTTACTAGTGAGAAGTGCAAAAGGTGCAAGAGCTTTCTTGTACCCTATTGTTGAGGAGCATGACATGGTGAATTTTGAGGTGCTTAGCATCTTTCATCCCACCAACGATGTGATCAACTCAGTTGTTCTTCTTCGCAAGCCTAAAGCTTAA 855 0.4175 MASFQSFNFEAQIPAELLIAQIMQLHASISKLESLRPSKQVNSLFTHLVNLCTLPSSIDIEALPQEVKIMRENLIKLCGHAEGLLELEFSTFISLTPKPLNNLTLFPYYGNYVKLANLENKILEENGVVNSKKVAFVGSGPMPLTSIIMATHHMESTHFDNFDIDEKANEMARKIVASDATLERRMKFETQDIMEVRERLGQYDCIFLAALVGMSREAKNKILGHIRRYMKEGGVLLVRSAKGARAFLYPIVEEHDMVNFEVLSIFHPTNDVINSVVLLRKPKA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0561 284 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Apr2g0561 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Apr2g0561 284 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Apr2g0561 284 Gene3D Vaccinia Virus protein VP39 17 283 IPR029063 -
Apr2g0561 284 CDD AdoMet_MTases 162 238 - -
Apr2g0561 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Apr2g0561 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 240 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0561 Apr-Chr2 6625126 6625980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0561 17 281 Nicotianamine Synthase Gene Family AT5G56080 51.301 1.21e-93 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0561 K05953 - gmx:100819726 487.648