Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0547 ATGACAGGACCTGTGATCACAGAAGTTTCACCGAGTGATGGACCCTTATGTGAATCCTCATTTGTTGTGAGCTTCTTCGTGCCAAAAGAGAACCAACCAAACCCTCCTCCTGCAAAGGGTCTCCATGTCCAAAGATGGAAAAATGTGTATGTAGCAGCAAGACAATTTGGTGGATATGTAACTGATTCAAATGTTGGGGTGGAAGCTGCTGCTTTGCAAGCTAGTATTGCTGGCACTGATTGGTCTGCTGCAATTGACAAAAGCCACAGAGCTGGTCATGCTTCTGTTTACACTGTAGCACAATACAATGACCCTTTTGAATATGATAATAGGGTGAATGAGATATGGTTCTTGTTTGATATGGGAAATGAACTTCATGCAATGTGA 387 0.4264 MTGPVITEVSPSDGPLCESSFVVSFFVPKENQPNPPPAKGLHVQRWKNVYVAARQFGGYVTDSNVGVEAAALQASIAGTDWSAAIDKSHRAGHASVYTVAQYNDPFEYDNRVNEIWFLFDMGNELHAM* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0547 128 Gene3D Regulatory factor, effector binding domain 1 126 IPR011256 -
Apr2g0547 128 PANTHER F3F9.4 1 128 - -
Apr2g0547 128 PANTHER HEME-BINDING PROTEIN-RELATED 1 128 IPR006917 -
Apr2g0547 128 Pfam SOUL heme-binding protein 1 117 IPR006917 -
Apr2g0547 128 SUPERFAMILY Probable bacterial effector-binding domain 1 119 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0547 Apr-Chr2 6286250 6287676 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0547 - - aprc:113855398 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0547 2 6286250 6287676 Apr2g0547 2 6286250 6287676 ECH