Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0523 ATGAGGTTTGTGAATTACGTAGCACAATGGAAAAGCGCGGCAAAGGAAGCGTTGGATCGCACTGCAATCGCTGCCAAGTTCCTTTGTTGGCTTCACATAACGAGCAACTATCTCTGTTCCTCAACTAACGTCGAAGGGCCTAGCATGCTCCCCACCCTCAATGTCGCCGGCGACGTCGTTCTCGTCGACCACATCTCTCCACGCCTCGGTATCATTGCTCATGGCGATTTGGTTCTCGTTCGCTCCCCTGTCAACCCTAATCGGAGCATCACCAAGCGCGTTGTGGCCGTCGAAGGGGACACCGTTACTTACTTTGACCCTTCGCATGTTGATGCTACACAAATTGCTGTGGTGCCAAAGGGGCATGTTTGGATTCAAGGGGATAATGTTTATGCCTCCCTTGATTCACGGCATTTTGGTCCTGTTCCATATGCTCTTATAGAAGGAAAAGTCTTTTTACGGGTATGGCCATTTGATAGCTTTGGATTGCTAGGTCAATGA 501 0.497 MRFVNYVAQWKSAAKEALDRTAIAAKFLCWLHITSNYLCSSTNVEGPSMLPTLNVAGDVVLVDHISPRLGIIAHGDLVLVRSPVNPNRSITKRVVAVEGDTVTYFDPSHVDATQIAVVPKGHVWIQGDNVYASLDSRHFGPVPYALIEGKVFLRVWPFDSFGLLGQ* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0523 166 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 6 164 - -
Apr2g0523 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Apr2g0523 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Apr2g0523 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Apr2g0523 166 Pfam Signal peptidase, peptidase S26 28 105 IPR019533 GO:0004252|GO:0006465
Apr2g0523 166 Pfam Signal peptidase, peptidase S26 115 156 IPR019533 GO:0004252|GO:0006465
Apr2g0523 166 SUPERFAMILY LexA/Signal peptidase 37 164 IPR036286 -
Apr2g0523 166 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 6 164 - -
Apr2g0523 166 CDD S26_SPase_I 44 151 IPR019533 GO:0004252|GO:0006465
Apr2g0523 166 ProSitePatterns Signal peptidases I signature 3. 123 136 IPR019758 GO:0004252|GO:0016021
Apr2g0523 166 Gene3D Umud Fragment, subunit A 35 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0523 Apr-Chr2 6007162 6011253 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0523 49 165 MADS-box Gene Family AT1G29960 50.847 4.38e-39 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0523 K09647 - zju:107414309 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0523 2 6007162 6011253 Apr2g0523 2 6007162 6011253 ECH