Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0519 ATGAGGAATTCCTTGGTTATAGCCTTCTCTATAACCATATGCTTCATCGCCTTTGTGATATCCAAGATTTTTATATCGATCCTCCTCTACAAGAGATGGAGAAGAAAACATGTGATATATGAAGAAGGTTATGCAGGAGGGAAGATGGTAATATTTAGGTCCTCAGTGCTTAAGTCTCTCACATCTGATGTGATCTTAAAGAAGACACAGAAACTGAACAACAAGGACATTATTGGATCTGGTGGTTATGGTGTGGTTTATGAACTAAAACTAAATGACTCCACAGCCTTTGCGGTGAAAAGACTTAACCGAGGAACAGCACAGAGAGACAAAGGTTTTGAGAGAGAGTTGGAAGCAATGGCAGACATAAAACACCGCAACATTGTGACTCTTCATGGATATTACACTGCACCACTCTACAATCTTCTCATATATGAGTTAATGCCCAATGGAAGTTTGGATTCCTTTTTGCATGGAAGATCAAAGAACAAGAAGGTTTTGGATTGGCCAACAAGATACAGGATAGCTAAAGGTGCTGCTAGAGGAATATCATATCTTCACCATGATTGCATCCCTCACATTATCCATAGAGACATCAAGTCAAGTAATATATTGTTGGATCAAAATATGGAGGCCCGAGTTTCCGATTTTGGATTAGCCACTTTGATGCAACCGAATGAAACTCATGTTTCAACAATTGTGGCTGGAACTTTTGGATACTTGGCACCTGAATATTTTGATACAGGAAGAGCAACGGCAAAAGGGGATGTTTATAGCTTTGGAGTTGTGCTATTGGAGCTTTTAACTGGGAAAAGACCTAGTGATGAAGCATTTATGGAAGAGGGAACCAACCTTGTCACATGGGTCAAGGCTGTTGTTCAAGAGAAGAAGGAAGAGTTAGTTCTTGATGATAGCTTAGAGTCTTGTCCAATGCAAGAGGTCAACAAGGTTTTCAACATTGCTATGATGTGTCTTGAACCAGATCCCTTGAAGAGGCCAAATATGGCTGAGATTGTCAACTTGCTTGAGTGA 1032 0.4012 MRNSLVIAFSITICFIAFVISKIFISILLYKRWRRKHVIYEEGYAGGKMVIFRSSVLKSLTSDVILKKTQKLNNKDIIGSGGYGVVYELKLNDSTAFAVKRLNRGTAQRDKGFERELEAMADIKHRNIVTLHGYYTAPLYNLLIYELMPNGSLDSFLHGRSKNKKVLDWPTRYRIAKGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMEARVSDFGLATLMQPNETHVSTIVAGTFGYLAPEYFDTGRATAKGDVYSFGVVLLELLTGKRPSDEAFMEEGTNLVTWVKAVVQEKKEELVLDDSLESCPMQEVNKVFNIAMMCLEPDPLKRPNMAEIVNLLE* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0519 343 SUPERFAMILY Protein kinase-like (PK-like) 53 342 IPR011009 -
Apr2g0519 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Apr2g0519 343 Gene3D Phosphorylase Kinase; domain 1 39 147 - -
Apr2g0519 343 SMART serkin_6 72 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0519 343 Gene3D Transferase(Phosphotransferase) domain 1 148 343 - -
Apr2g0519 343 ProSiteProfiles Protein kinase domain profile. 72 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0519 343 Pfam Protein kinase domain 74 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0519 343 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 343 - -
Apr2g0519 343 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Apr2g0519 343 PANTHER BNAA07G39120D PROTEIN 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0519 Apr-Chr2 5981288 5988994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0519 5 343 Receptor kinase-like Gene Family AT2G35620 46.784 9.47e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Apr2g0519 Pkinase 6.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0519 - - ahf:112703495 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0519 2 5981288 5988994 Apr2g0519 2 5981288 5988994 ECH