Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0487 ATGAATACAAGTTACCCTCCTTTCTTCTTCCTTTTCCTCCTTCCTGCCTTTTGCTTTGCCTCCTTAGCTTTTGGAGCCACTCTGTCCACAGATGAAGTGCAAGTTCTGAAAGATATAGGTAAGACACTTGGGAAGGACTGGGATTTCAGCGTAGATCCATGCAGTGGAGAACGTAATTGGACATCGTCTGTTCAAGTGAAAGGGAGCGAAAATGCTGTCACATGCGGCCATTGCTCCTATGCTAATCAAACCAATTGTCATGTCACTAACATAATTTTGAAAGAACAAAATCTCCCAGGCATTCTACCGCCGGATTTGATCAGGTTGCCTTATCTTCAAGAAATTGATCTTACTCGCAACTACCTCAACGGTACAATTCCTAAAGAATGGGGCTCTATGAAGCTTGTCAACATTTCCCTCCTTGGAAATCGATTAACGGGTTCAATACCAAAAGAGATAGCAAACATATCCACTCTTCAAAGTTTGGTATTGGAGAGCAATCAACTGTCTGGAGAGCTTCCACCTGAGCTTGGGAATCTAATCCAAATTCAAAGACTGTTACTTTCTTCCAACAATTTTACTGGAAAACTACCTGTAACATTGGCCAAGCTCACTACATTGCAAGATATTCGAATAAATGACAATCAATTCTCAGGGAAGATACCTGATTTTATTCAAAGCTGGACAAGTCTCCAAAGATTAGATATTGGAGCAAGTGGATTAAGTGGGCCAATTCCTTCTGGAATTTCACATTTGGAGAACTTAATAGACTTGAGAATTAATGATCTAAATGGATCTGAATATTCATCTTTTCCGGAACTTAATAAAACGAAGTTGACATATTTGATCCTGAGAAATTGCAACATCAATGGAACACTACCTCCATATCTTGGCAATATGATAAGTTTAAAAAATTTAGACCTTAGCTTTAACAGATTGAGTGGACCAATTCCGAGAAACTATGATGCCCTAAGAAAGGTGGATTACATATATTTAACTGGAAATCTTCTCACGGGACTAGTGCCTCCATGGACAGAGAACGCTGATAATGTAGATCTTTCATATAACAACTTCAGCATTGCAAGCCAGGGGAGTCAAACATGTCAAAATAGAAACGTGAACGTGTTTGCTAGCTCTTTGACGCCCAATGACTCAGGAATTGTTTCATGTTTGAGAAGCGTTGTCTGTCCTAAAACCTCATACTCCCTTCATATAAATTGTGGTGGAACAATGGTAACAGTCAATAGAAGCAAATATGATGATGATTTAGATGAAGGAGGACCAGCTAAATTTCAGCTCAGTGCAACAAGAACATGGGCATTTAGCACTACTGGTAACTTCATGAATAATGAATACGCAAACAACTATATTTGGTCAAACAAATCTGTGCTTTCTGTGGCCAATGCTGAACTCTACATGAATGCACGAGTTTCTCCCACTTCTCTAACTTATTATGGATTTTGCTTGGGAAACGGAAACTACACTGTAAATCTACATTTTGCCGAAATCATTTTCATTGATGGTCAAACATATAACAGTCTAGGAAGGAGAGTATTTGACATCTACATTCAGGGAAAGCTGGTGCAGAAGGACTTCAATATTGTAGAAGAAGCAGGGGGAATTGGTAAGGCAATCATAAAACCATTCACTGCTATTGTGACTAATAATACCTTGGAAATCCGCTTTAAATGGGCTGGAAAAGGGACAACTGTTATCCCAAATAGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTGGAATCAGATTCTCCACCTCCCTCAGAAAATGGAAGTAGCATATCTGCAGGATCTGTGGTAGGAATTGTGCTTGCAGGAGCAATTATTATCATCCTTGTATTTGGTCTACTTTGGTGGAAAGGTTGTATAGGAAAAAAACATTCTTTAGGCGGAGAGCTAAAGGGTTTAGACTTGCGTACGGATTTATTTACTTTAGGACAAATCAAAGCAGCAACAAACAACTTTGATATTGCCAATAAGATTGGAGAAGGAGGATTTGGTTCTGTGTACAGGGGATGTTTATCAGATGGGACATTAATAGCAGTCAAGCAGCTTTCTTCTAAATCAAAGCAAGGAAATCGTGAGTTTTTAAATGAAATAGGCATGATTTCTGCTTTGCAGCACCCTCATCTTGTTAAGCTCTATGGATGTTGTGTTGAGGGAGATCAACTATTGTTGGTATATGAATATTTGCAAAACAATAGCCTTGCTCGCGCTTTATTTGGTCCTCAAGAACACCAAATAAAATTGGATTGGCCAACAAGATACAACATCTGTGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGACTAAAGATTGTTCATAGGGATATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTCAACCCAAAGATATCTGACTTTGGTTTGGCCAAGCTTGATGAAGAGGACAACACTCATATTAGCACCCGAATAGCTGGGACATATGGATATATGGCTCCGGAATATGCCATGCATGGTTATTTGACTGAGAAAGCAGATGTCTATAGCTTTGGAATTGTTACCCTGGAAATCATAAATGGAAGTAACAATACCACTCACCGAAAAAAAGAAGAGTCATTCCATCTTCTTGAATGGGCACGTCTATTGAAAGAAAAAGGCAATTTAATGGAGCTAGTTGATAGAAGATTGGGTTCAGACTTCAACAAAGAGGAGGTAATGGTGATGATCAATGTGGCTCTCTTATGCACAAATGTGTCTCCAACACTTAGGCCAACCATGTCATCAGTAGTAAGCATGCTAGAAGGAAGAACTGTTGTTCAAGAAATGGTTTTAGAAACAAATGAGTTTTTGGATGAGAAGAAGTTGGAGGCAATGAGACAATATTACAATGATCAAAGTACTTCAACTGAAGGGCCATGGACTGCTTCTACTTCTGTTACAGATCTATATCCTATACACTTAGATTCTTCTTACTGGGAGAAAAGAGATTAG 2991 0.3892 MNTSYPPFFFLFLLPAFCFASLAFGATLSTDEVQVLKDIGKTLGKDWDFSVDPCSGERNWTSSVQVKGSENAVTCGHCSYANQTNCHVTNIILKEQNLPGILPPDLIRLPYLQEIDLTRNYLNGTIPKEWGSMKLVNISLLGNRLTGSIPKEIANISTLQSLVLESNQLSGELPPELGNLIQIQRLLLSSNNFTGKLPVTLAKLTTLQDIRINDNQFSGKIPDFIQSWTSLQRLDIGASGLSGPIPSGISHLENLIDLRINDLNGSEYSSFPELNKTKLTYLILRNCNINGTLPPYLGNMISLKNLDLSFNRLSGPIPRNYDALRKVDYIYLTGNLLTGLVPPWTENADNVDLSYNNFSIASQGSQTCQNRNVNVFASSLTPNDSGIVSCLRSVVCPKTSYSLHINCGGTMVTVNRSKYDDDLDEGGPAKFQLSATRTWAFSTTGNFMNNEYANNYIWSNKSVLSVANAELYMNARVSPTSLTYYGFCLGNGNYTVNLHFAEIIFIDGQTYNSLGRRVFDIYIQGKLVQKDFNIVEEAGGIGKAIIKPFTAIVTNNTLEIRFKWAGKGTTVIPNRSVYGPLISAISVESDSPPPSENGSSISAGSVVGIVLAGAIIIILVFGLLWWKGCIGKKHSLGGELKGLDLRTDLFTLGQIKAATNNFDIANKIGEGGFGSVYRGCLSDGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPHLVKLYGCCVEGDQLLLVYEYLQNNSLARALFGPQEHQIKLDWPTRYNICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTEKADVYSFGIVTLEIINGSNNTTHRKKEESFHLLEWARLLKEKGNLMELVDRRLGSDFNKEEVMVMINVALLCTNVSPTLRPTMSSVVSMLEGRTVVQEMVLETNEFLDEKKLEAMRQYYNDQSTSTEGPWTASTSVTDLYPIHLDSSYWEKRD* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0487 996 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 75 289 - -
Apr2g0487 996 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 289 359 - -
Apr2g0487 996 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 379 963 - -
Apr2g0487 996 Pfam Protein tyrosine and serine/threonine kinase 664 933 IPR001245 GO:0004672|GO:0006468
Apr2g0487 996 CDD STKc_IRAK 668 935 - -
Apr2g0487 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Apr2g0487 996 Gene3D Ribonuclease Inhibitor 34 197 IPR032675 -
Apr2g0487 996 ProSitePatterns Protein kinases ATP-binding region signature. 668 690 IPR017441 GO:0005524
Apr2g0487 996 Gene3D Ribonuclease Inhibitor 273 357 IPR032675 -
Apr2g0487 996 SUPERFAMILY L domain-like 84 358 - -
Apr2g0487 996 Gene3D Transferase(Phosphotransferase) domain 1 738 949 - -
Apr2g0487 996 Gene3D Ribonuclease Inhibitor 198 272 IPR032675 -
Apr2g0487 996 Gene3D Phosphorylase Kinase; domain 1 637 737 - -
Apr2g0487 996 Gene3D - 398 590 - -
Apr2g0487 996 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0487 996 ProSiteProfiles Protein kinase domain profile. 662 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0487 996 SUPERFAMILY Protein kinase-like (PK-like) 647 944 IPR011009 -
Apr2g0487 996 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 379 963 - -
Apr2g0487 996 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 289 359 - -
Apr2g0487 996 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 75 289 - -
Apr2g0487 996 Pfam Malectin domain 402 585 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0487 Apr-Chr2 5640192 5652122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0487 22 962 Receptor kinase-like Gene Family AT1G53420 56.947 0.0 1020
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr2g0487 PK_Tyr_Ser-Thr 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0487 - - gmx:732563 1514.21