Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0486 ATGCGGCGTTTTGTTATGTCAAGCTCCAAACACATGTCTATGTTCTTCATCTTTGTGTCCCTGGCTTTGAATTGCTTCCAACGCTTTGGATCCAACGCTCAACTCATACCACAAAACGAAGTGAAGTTACTACAAGCAATATCAGACAAGGTAGAGAACTTGAATTGGAAGCTTACAAGGCGTTCCTGCAACGGGCATAGAGGGTTTGATAACAGGAATATTTCAAGGGATCAGGATCAAGTCACAAGAAATGTTACGTGCGATTGCTCTTTCAACAATAGAACCATTTGCCATGTAACTTTGATTGTGCTCAAGGGTCTCAATATATCTGGAGCTATACCCAATGAATTTGGAAATCTAACTCAACTGATAATACTGTCACTTTTGGGGAATCGACTTACTGGTTCAATTCCTTCAGAAATTGGTGATATGACTAATCTGACAGAACTGAACTTGGAAGATAATCAACTTGAAGGACCTCTTCCTCCCAGCCTTGCAAATTTGAGCAGCTTGCAGAGATTACTTCTTTCTTCAAATAATTTCACAGGGACAATACCAGAAGCATATGGAAATCTAAAGAATCTCATTCAGTTTAGGATAGATGGAAGCAGTTTGTCTGGGAAGATTCCTAGTTTTATTGGGAACTGGACCAAACTTGAAAGATTGGATTTGCAGGGCACATCCTTGGAAGGCCCAATTCCCTCTGTGATATCTAACTTGACAAGTTTGACAGAATTGCGAATATCTGATTTGAAGGGTCCAACTATGGGATTTCCCAATCTGAAGGATTTGAAACACATGCAAAGACTGGAATTGAGAAACTGCTTAATCACTGGTTCCATTCCAGGCAACATTGGTGAAATGGAAAGTTTAAAAACATTAGATCTGAGTTCTAACAGATTGACTGGTTCAATCCCAGATTCATTTCAGGACTTCCAAAAGATTAATTTCATGTTTCTGACTAACAATTCTCTAAGTGGACCAATTCCTGGATGGATACTGAACAGCAAACAGAATATTGATTTATCTTATAACAATTTTACACAGGCGTCTACATCTACCTGTGAGATCTTGGACGTGAACTTAGCTTCCAGTCTCTCTCCTTCGGCTAACACTTCATTATCCTGTTTGAAGAGGGGCCTACCTTGTTCAGGAAAACCCCAGTATCATTCACTGTTCATAAATTGTGGAGGACCTGAAACAGAGTTTGAGGGGTATGAATATGAAGCTGACACCAATCTACGTGGCATTTCAACTTTTGTTTCTAGTAATAGCGGCAAATGGGCTTATAGCAGCACTGGAGTATATCTGGGAAATGAAAAGGCTGATTATGTAGCAACAAATCAGTTTTCTTTGAATATTACTGGCCCTGAATACTACCGAACAGCCCGCATGGCCCCTTTGTATCTTAATTACTATGGCCTTTGTATGCTGAATGGCAATTACAAAGTGAAACTTCATTTTGCTGAGATAGTGTTTTCTGATGACCAGAAGTTTAGCAGCCTTGGAAAGCGCATATTTGATGTTTCAATCCAAGGTTTTAAATATTTGAAAGATTTAAACATTGTAGAAGAAGCTGGTGGAGTTGGTAAAGGAGTCACTAAGGAGTTTAATGTTGATGTTAATGACAGCACCTTGGAAATCCACTTATCCTGGGCAGGGAAAGGAACTAATGCCATTCCTATAAGAGGTGTATATGGACCTCTTATATCCGCTATCACTGTGACACCAAACTTTAAAGTTCCCTCAAATGGGCTGTCTACTGGAGCAATTGTTGGAATTGTGACCGGGTCATGCATGTTTGTCATACTGATACTCTTTGCTCTTTGGAAGATAGGTTTTCTTTGTGGGGAAGATCCAAGAGACAAAGAACTACAAGATCTGAAGACGGGTTATTTCAGTTTAAGACAAATTAAAGCTGCTACTGATAACTTTGACCCAGCAAATAAGATAGGTGAAGGAGGCTTTGGACCAGTATACAAGGGTGTACTGTCAGATGGTACTGTGATTGCTGTTAAGCAGCTTTCCTCAAAATCAAAGCAAGGGAACCGCGAATTTGTCAATGAAATTGGCATGATATCAGCTTTGCAACATCCAAATCTTGTGAAGCTTTATGGCTGCTGCATTGAAGGCAACCAGTTGCTGCTAATATATGAATACATGGAGAACAATAGCCTTGCTCGTGCACTTTTTGGTAAAGAAGAACAGAAGATACACTTGGATTGGCCCACAAGAATGAAGATCTGTGTGGGCATTGCAAGGGGATTAGCTTATCTTCATGAGGAATCTAGGTTGAAAATAGTACACAGGGATATTAAGGCAACCAATGTCTTACTTGATAAGCATCTGAATGCCAAAATCTCTGACTTTGGCTTAGCCAAACTTGATGAAGAAGAGAATACCCATATCAGCACAAGAATAGCTGGGACAATTGGTTACATGGCTCCTGAGTATGCTATGCGGGGTTACCTGACTGACAAGGCAGATGTCTATAGCTTCGGAGTTGTAGCTTTAGAGATTGTTAGTGGAAAGAGCAACACAAATTACAGGCCAAAGGAAGAGTTTGTATATCTTTTAGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTTCTGGAGTTGGTGGATCCAAGTCTTAGTTCAGGCTACTCAGCAGAAGAGGCCATGAGAATGCTGCAGTTGGCACTCTTGTGCACCAATCCATCTCCCACTCTTAGACCACCCATGTCATCAGTAGTGAACATGCTTGAAGGAAAAACTCCAATTCAAGCACCAATAATTAAACGCAGTGACAGTGCCCAAGATGTGAGATTTAAAGCCTTTGAGATGTTATCACAGGACAGCCAAACTCATGTTTCTTCTGCGTTCTCACAAGATAGTATTGAGCAAAGAAGCAAATCAATGGGGGGCCCATGGATTGACTCTTCGGTGTCTCTTCCAAGTAGAGATCATTATTCTTCAACCAATAAACTTATTCGAGGTTCCGATGATGTGTGA 2997 0.4057 MRRFVMSSSKHMSMFFIFVSLALNCFQRFGSNAQLIPQNEVKLLQAISDKVENLNWKLTRRSCNGHRGFDNRNISRDQDQVTRNVTCDCSFNNRTICHVTLIVLKGLNISGAIPNEFGNLTQLIILSLLGNRLTGSIPSEIGDMTNLTELNLEDNQLEGPLPPSLANLSSLQRLLLSSNNFTGTIPEAYGNLKNLIQFRIDGSSLSGKIPSFIGNWTKLERLDLQGTSLEGPIPSVISNLTSLTELRISDLKGPTMGFPNLKDLKHMQRLELRNCLITGSIPGNIGEMESLKTLDLSSNRLTGSIPDSFQDFQKINFMFLTNNSLSGPIPGWILNSKQNIDLSYNNFTQASTSTCEILDVNLASSLSPSANTSLSCLKRGLPCSGKPQYHSLFINCGGPETEFEGYEYEADTNLRGISTFVSSNSGKWAYSSTGVYLGNEKADYVATNQFSLNITGPEYYRTARMAPLYLNYYGLCMLNGNYKVKLHFAEIVFSDDQKFSSLGKRIFDVSIQGFKYLKDLNIVEEAGGVGKGVTKEFNVDVNDSTLEIHLSWAGKGTNAIPIRGVYGPLISAITVTPNFKVPSNGLSTGAIVGIVTGSCMFVILILFALWKIGFLCGEDPRDKELQDLKTGYFSLRQIKAATDNFDPANKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGKEEQKIHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKHLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLSSGYSAEEAMRMLQLALLCTNPSPTLRPPMSSVVNMLEGKTPIQAPIIKRSDSAQDVRFKAFEMLSQDSQTHVSSAFSQDSIEQRSKSMGGPWIDSSVSLPSRDHYSSTNKLIRGSDDV* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0486 998 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 363 977 - -
Apr2g0486 998 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 277 335 - -
Apr2g0486 998 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 108 278 - -
Apr2g0486 998 MobiDBLite consensus disorder prediction 952 998 - -
Apr2g0486 998 Pfam Protein tyrosine and serine/threonine kinase 649 914 IPR001245 GO:0004672|GO:0006468
Apr2g0486 998 SMART LRR_typ_2 168 191 IPR003591 -
Apr2g0486 998 SMART LRR_typ_2 288 311 IPR003591 -
Apr2g0486 998 SMART LRR_typ_2 144 167 IPR003591 -
Apr2g0486 998 MobiDBLite consensus disorder prediction 952 988 - -
Apr2g0486 998 Pfam Malectin domain 392 573 IPR021720 -
Apr2g0486 998 PANTHER - 277 335 - -
Apr2g0486 998 PANTHER - 363 977 - -
Apr2g0486 998 PANTHER - 108 278 - -
Apr2g0486 998 Gene3D Ribonuclease Inhibitor 255 361 IPR032675 -
Apr2g0486 998 SUPERFAMILY L domain-like 85 348 - -
Apr2g0486 998 Pfam Leucine rich repeat 266 325 IPR001611 GO:0005515
Apr2g0486 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 767 779 IPR008271 GO:0004672|GO:0006468
Apr2g0486 998 Gene3D Ribonuclease Inhibitor 45 164 IPR032675 -
Apr2g0486 998 SMART serkin_6 645 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0486 998 ProSiteProfiles Protein kinase domain profile. 645 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0486 998 CDD STKc_IRAK 651 918 - -
Apr2g0486 998 Gene3D Phosphorylase Kinase; domain 1 618 720 - -
Apr2g0486 998 SUPERFAMILY Protein kinase-like (PK-like) 629 917 IPR011009 -
Apr2g0486 998 Pfam Leucine Rich Repeat 146 168 IPR001611 GO:0005515
Apr2g0486 998 Gene3D - 390 578 - -
Apr2g0486 998 Gene3D Transferase(Phosphotransferase) domain 1 721 928 - -
Apr2g0486 998 Gene3D Ribonuclease Inhibitor 165 254 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0486 Apr-Chr2 5607451 5619724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0486 4 983 Receptor kinase-like Gene Family AT1G53440 61.811 0.0 1228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr2g0486 PK_Tyr_Ser-Thr 5.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0486 - - gmx:121173337 1630.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0486 2 5607451 5619724 Apr2g0486 2 5607451 5619724 ECH