Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0479 ATGGAGAATCAACCTTCAAACGGTAGAAAGGCAATGGAAGAAGAGCTTATCAAAGGCCGTGACATAGCAACCCAATTACTTGAAGTACTTGTTCATAAATCCAACACTCACCTTGGAGATGTAGAAGAAGGGTTAATGCTAACATTTGCCCAAGATCTTGTTCGCAATGTATTGAGATCATTCACAAATACCCTTTTGTTATTGAACACTGATAATAATGATGTCTCCGATGAGGTTGCTATGCCTATCATTATCAAAGATGTAAAATGCCCAAAGCCTGAGGATAAGGATGAGGCTTGCAAGAGTTTCTTCAATGTTAAAAGACGAAGTGGGTGCCACAAGAGAAAATCAACTGCACCGACCTGGGCGAAGAATAGCTCAGTTCTGATTGAAGATGGATATGCATGGAGAAAATATGGACAAAAAATGACGATGAATGCAAAATACCTCAGGAGTTACTACAGATGCACTCACAAGTATGATCAGGGTTGTCCAGCAATCAAACAGGTGCAGAGAATTCAGGAGGACCCTCCATTGTACCGAACAACGTATTATGGCTATCACAATTGTAAAAGCGCTTTTAGTCCAGAGATGATGTGGAAACCAGCTTCTTCTTCTGACTCTTCTATGTTACTTAGCTTCAGCAACAGCTTCCCAACCAAAGAAGAATATCCATTTTCAACCTTCAAGCAGGAGTCTATGGAAGTGATTCAGGATTACCATATTGCTCACAACCAGTTACCCTCTTCAGATGAACTTCTCTTATGTGATTATGAACTTGATTTCAATTGTTTGAGGCATGTTACTGTGCTATCATCCACTGAGTATGTTCAAGTTGAAGAAGATCTGGGGTTCTTAGGATATGGTTGGGAGCAGCAACTCTCGGATGAGGTTTTTGAGCTATTTATCTTCTGA 915 0.4033 MENQPSNGRKAMEEELIKGRDIATQLLEVLVHKSNTHLGDVEEGLMLTFAQDLVRNVLRSFTNTLLLLNTDNNDVSDEVAMPIIIKDVKCPKPEDKDEACKSFFNVKRRSGCHKRKSTAPTWAKNSSVLIEDGYAWRKYGQKMTMNAKYLRSYYRCTHKYDQGCPAIKQVQRIQEDPPLYRTTYYGYHNCKSAFSPEMMWKPASSSDSSMLLSFSNSFPTKEEYPFSTFKQESMEVIQDYHIAHNQLPSSDELLLCDYELDFNCLRHVTVLSSTEYVQVEEDLGFLGYGWEQQLSDEVFELFIF* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0479 304 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 281 IPR044810 GO:0003700
Apr2g0479 304 SUPERFAMILY WRKY DNA-binding domain 126 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g0479 304 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g0479 304 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 281 - -
Apr2g0479 304 ProSiteProfiles WRKY domain profile. 125 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g0479 304 Gene3D WRKY domain 115 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g0479 304 Pfam WRKY DNA -binding domain 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0479 Apr-Chr2 5518906 5523966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0479 15 192 WRKY Transcription Factor Family AT3G56400 38.462 1.13e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr2g0479 WRKY 5.5e-23 CL0274