Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0478 ATGGAGAATCAGCCTCCAAATGGCAAAAGGGCAATGGAAGAAGAACTAATCAGAGGTCGTGACATGGCAAATCAGTTACTTGAAGTACTTGCTCATAAATCGTATGGTCAACGTGGAGATATTGAAGGGTCAAAGTCAGTGTTAGATTTTGCTGAAGATCTTGTGTGCAAGATCTTGTGTTCATTCACGAATACCCTTTTGCTCTTGAGCTCCCATGATGATGTCTCCGATGATGTCGTAGCTTCTATCACTCTCAGAGATGTTTCTTTGTCCACCAGTTCCCTAAAGCTGGAGAATATGGTTGAAACTTGCAAGATTCGCAAGACTCTCAATCCTAAAAATAGAAGAGGGTGCTACAAGAGGAAATCAATTGCGCCAACATGGGAGAGGGACAGCTCAATACAGATCGAAGATGGCTATGGTTGGAGAAAGTATGGACAAAAAAGGACATTGAATGCCAAATATCTCAGGAGCTACTACAGGTGCACTCACAAGTACGATCAAGGATGCGAAGCAATCAAACAGGTCCAGAAAATTCAAGATGACCCTTCACTCTATCGAACAACATATTTTGGTCATCACACGTGCAAAAGCTCTTTAAATTCTGAGATAATTTTGGAACCTGTTTCTCCTTCTAGCTCTTCCATATTACTTAGCTTTAATAATAGCATTCAAAGCAAACATGAACATTTGTTTTCATCATCGTTACTTGCATCAACAAAACATGAGCCCATGGAAGTGATTCAGGAAGACCATATTGCTCAGAATCAATTGTCCTCGTCAGAAGACCTCCTATCATGTGATTATGATATTTGTTTTGAATATTTGAGGCATGTTATGCTGTCATCAACTGAATCTGTTGAACTTAGCAATGCTTATGAGAAAATTGAATTTTGA 897 0.3946 MENQPPNGKRAMEEELIRGRDMANQLLEVLAHKSYGQRGDIEGSKSVLDFAEDLVCKILCSFTNTLLLLSSHDDVSDDVVASITLRDVSLSTSSLKLENMVETCKIRKTLNPKNRRGCYKRKSIAPTWERDSSIQIEDGYGWRKYGQKRTLNAKYLRSYYRCTHKYDQGCEAIKQVQKIQDDPSLYRTTYFGHHTCKSSLNSEIILEPVSPSSSSILLSFNNSIQSKHEHLFSSSLLASTKHEPMEVIQEDHIAQNQLSSSEDLLSCDYDICFEYLRHVMLSSTESVELSNAYEKIEF* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0478 298 ProSiteProfiles WRKY domain profile. 136 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g0478 298 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 290 IPR044810 GO:0003700
Apr2g0478 298 SUPERFAMILY WRKY DNA-binding domain 133 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g0478 298 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 290 - -
Apr2g0478 298 Pfam WRKY DNA -binding domain 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g0478 298 Gene3D WRKY domain 120 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g0478 298 SMART WRKY_cls 136 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0478 Apr-Chr2 5510173 5512210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0478 15 199 WRKY Transcription Factor Family AT3G56400 40.323 1.37e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr2g0478 WRKY 1.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0478 - - gmx:100792193 365.155