Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0476 ATGAGATCAACTGCACCAACATGGGAGAAGAACAGCTCAATTCTGGCTGAAGATGGGTATGCATGGAGAAAGTATGGACAAAAAATGACAATGAATGCAAAATACCTTAGGAGCTACTATAGATGCACTCACAAGTATGATCAGAGTTGTCCAGCGATCAAACAGGTGCAGAGAATTCAAGAAGACCCTCCATTGTACCGAACAACGTACTATGGCAATCACAATTGCAATAGCTCTATAAATTCAGATATAATGTTGGAACCTGCTTCTTCTTCTGACTCTTCTATGTTCCTTAGCTTCAATAACACCTTCCTAAGCAAAGAAGAATACCCATTTTCACCATCACATTTTAAATCCACAAAACAGGAGCATATGGAAGTGATTCGGAATGACCATATTGTTCAAAACCAATTACCCCCATTAGATTACCTCCTATTATGTGACTATGAACTAGATTTCAATTATTCCAGGCATGGTACTGTGCTATCATCCACTGAATCTGTTCAATTTGATACAGTTTATGGGAGCAGTTTGAATTTTGATGGCTAG 549 0.3843 MRSTAPTWEKNSSILAEDGYAWRKYGQKMTMNAKYLRSYYRCTHKYDQSCPAIKQVQRIQEDPPLYRTTYYGNHNCNSSINSDIMLEPASSSDSSMFLSFNNTFLSKEEYPFSPSHFKSTKQEHMEVIRNDHIVQNQLPPLDYLLLCDYELDFNYSRHGTVLSSTESVQFDTVYGSSLNFDG* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0476 182 Pfam WRKY DNA -binding domain 17 77 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g0476 182 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 2 172 - -
Apr2g0476 182 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 172 IPR044810 GO:0003700
Apr2g0476 182 SUPERFAMILY WRKY DNA-binding domain 14 77 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g0476 182 Gene3D WRKY domain 4 79 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g0476 182 SMART WRKY_cls 16 78 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g0476 182 ProSiteProfiles WRKY domain profile. 11 79 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0476 Apr-Chr2 5489363 5490009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0476 2 78 WRKY Transcription Factor Family AT3G56400 53.247 7.63e-25 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr2g0476 WRKY 7.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0476 - - gmx:102663141 280.796