Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr2g0476 | ATGAGATCAACTGCACCAACATGGGAGAAGAACAGCTCAATTCTGGCTGAAGATGGGTATGCATGGAGAAAGTATGGACAAAAAATGACAATGAATGCAAAATACCTTAGGAGCTACTATAGATGCACTCACAAGTATGATCAGAGTTGTCCAGCGATCAAACAGGTGCAGAGAATTCAAGAAGACCCTCCATTGTACCGAACAACGTACTATGGCAATCACAATTGCAATAGCTCTATAAATTCAGATATAATGTTGGAACCTGCTTCTTCTTCTGACTCTTCTATGTTCCTTAGCTTCAATAACACCTTCCTAAGCAAAGAAGAATACCCATTTTCACCATCACATTTTAAATCCACAAAACAGGAGCATATGGAAGTGATTCGGAATGACCATATTGTTCAAAACCAATTACCCCCATTAGATTACCTCCTATTATGTGACTATGAACTAGATTTCAATTATTCCAGGCATGGTACTGTGCTATCATCCACTGAATCTGTTCAATTTGATACAGTTTATGGGAGCAGTTTGAATTTTGATGGCTAG | 549 | 0.3843 | MRSTAPTWEKNSSILAEDGYAWRKYGQKMTMNAKYLRSYYRCTHKYDQSCPAIKQVQRIQEDPPLYRTTYYGNHNCNSSINSDIMLEPASSSDSSMFLSFNNTFLSKEEYPFSPSHFKSTKQEHMEVIRNDHIVQNQLPPLDYLLLCDYELDFNYSRHGTVLSSTESVQFDTVYGSSLNFDG* | 183 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr2g0476 | 182 | Pfam | WRKY DNA -binding domain | 17 | 77 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Apr2g0476 | 182 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 2 | 172 | - | - | |
Apr2g0476 | 182 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 2 | 172 | IPR044810 | GO:0003700 | |
Apr2g0476 | 182 | SUPERFAMILY | WRKY DNA-binding domain | 14 | 77 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Apr2g0476 | 182 | Gene3D | WRKY domain | 4 | 79 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Apr2g0476 | 182 | SMART | WRKY_cls | 16 | 78 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Apr2g0476 | 182 | ProSiteProfiles | WRKY domain profile. | 11 | 79 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr2g0476 | Apr-Chr2 | 5489363 | 5490009 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr2g0476 | 2 | 78 | WRKY Transcription Factor Family | AT3G56400 | 53.247 | 7.63e-25 | 96.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Apr2g0476 | WRKY | 7.4e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr2g0476 | - | - | gmx:102663141 | 280.796 |