Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0454 ATGTCCAATACCAATAGCAAGACAATATTATCTGCTGTGGCCTCTCTTGCAGCCTCGGCTATGCTGATGCGAAGCATCGCCAATGAATTCATTCCTCATCAAGTCATAGACTTTTTTCATTCAGGAATTCACAATCTTTCTCGTCAATTCTCTACCCAACTCACTATTGTCATTGAAGAATTTCAAGGGATGTCCAAAAACCAAGTTTTTGAGGCTGCAGAAGCCTTTCTAGGAAATAAAGCCACTCTCTCAGCACACAGGGTTAAAGCAAGCAAATCAGAGAATGATAAAAAGTTATCATTTGGTGTAGATAGAGATGAAGAAGTGAATGATGAATTTGAAGGCGTAAAAGTAAGGTGGAAATTTATATGCATACATACTGAGTCTTCTAGTAATAGTCATCATGATATGAATGCTTCTTTAAGGTCAGAAATAAGGTACTATGAGCTAAGCTTTCACAAGAAACACAAGGAGAAAATCTTCACTTCATATTTGCCATATATTTTGGAGAGAGCCAAGGCTATCAAAGAAGAGAACATGGCAGTGAAGCTTCACACGATTGATTATGGATGTTATTGGGATCAAAATGGTGTCAAATTTGATCATCCCATGACTTTCAAAACTCTTGCAATTGATGGAGAGCTTAAGAGGGAAGTGGTGAATGACTTAGACAAGTTTGTGAAGGGAAAAGAGTTCTATAAAAGAACTGGCAAAACTTGGAAACGTGGTTACCTTTTGTATGGTCCTCCTGGCACTGGCAAGTCTAGTCTTATTGCTGCTATGGCATGTCATCTCAACTATGATATATATGACTTGGATCTTACGGTTATCAATGACAATAATGAATTAAAGAAATTGATCCTTGGCATGTCCAACCGTTCTATACTTGTGATTGAGGATATTGACTGTAGTATAAAGCTTCAGAACCGAGAAGAAGCTGAGGATGCATCTCAAAATGGAGACAATAAGGTGACACTTTCAGGACTTCTGAACGTTATAGATGGTCTTTGGTCATGCTGTGGGGAGGAACGCATCATTATTTTTACAACCAATCACAAAGAAAGACTTGATCCAGCTCTGCTAAGGCCTGGCCGAATGGACATGCATGTTCACTTGTCATACTGCAACTTTTCTGCTTTTGAGCAATTGGCCTTCAATTACCTTGGAATTTCTCAACACAAACTCTTTGAACAGATTGAAGGGCTTCTAAATGAAGTTCAAGTGACTCCAGCTGAAATTGCAGGAGAGCTAATAAAGGTTGCTGATGTTGGAGAGTGCTTACAAGACATTGTCAAATTCCTCTACAAGAAGAAAATGTTGCAGGGCAAGACTCAAATTGAACAGAATATAAAGGAAGATCATGAAATAGGAGAAGAAAAGTTATGA 1386 0.3846 MSNTNSKTILSAVASLAASAMLMRSIANEFIPHQVIDFFHSGIHNLSRQFSTQLTIVIEEFQGMSKNQVFEAAEAFLGNKATLSAHRVKASKSENDKKLSFGVDRDEEVNDEFEGVKVRWKFICIHTESSSNSHHDMNASLRSEIRYYELSFHKKHKEKIFTSYLPYILERAKAIKEENMAVKLHTIDYGCYWDQNGVKFDHPMTFKTLAIDGELKREVVNDLDKFVKGKEFYKRTGKTWKRGYLLYGPPGTGKSSLIAAMACHLNYDIYDLDLTVINDNNELKKLILGMSNRSILVIEDIDCSIKLQNREEAEDASQNGDNKVTLSGLLNVIDGLWSCCGEERIIIFTTNHKERLDPALLRPGRMDMHVHLSYCNFSAFEQLAFNYLGISQHKLFEQIEGLLNEVQVTPAEIAGELIKVADVGECLQDIVKFLYKKKMLQGKTQIEQNIKEDHEIGEEKL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0454 461 Pfam ATPase family associated with various cellular activities (AAA) 245 373 IPR003959 GO:0005524|GO:0016887
Apr2g0454 461 SMART AAA_5 240 376 IPR003593 -
Apr2g0454 461 Gene3D - 193 370 IPR027417 -
Apr2g0454 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 423 IPR027417 -
Apr2g0454 461 Pfam Domain associated at C-terminal with AAA 31 123 IPR025753 -
Apr2g0454 461 Gene3D - 371 443 - -
Apr2g0454 461 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 5 449 - -
Apr2g0454 461 CDD AAA 241 374 - -
Apr2g0454 461 ProSitePatterns AAA-protein family signature. 344 362 IPR003960 GO:0005524|GO:0016887
Apr2g0454 461 PANTHER BCS1 AAA-TYPE ATPASE 5 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0454 Apr-Chr2 5248734 5250824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0454 214 376 Calmodulin-binding Proteins AT3G56690 25.146 5.95e-08 53.5