Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0448 ATGGCGGGGAAATTGTCGAAGACAGCTTATGATGCAAAAATGCTGAAACTTTTGAGAGAATACAGCCAGGTGTTGGTGGTTTCATCGGATAATGTGGGTTCCAACCAGCTTCAGGGCATACGGAGGGGACTCCATGCTGATTCCGTGGTTGTGATGGGAAAGAACTCAATGATGAAACGCTCTATTATCTTGGATGCTCAGAAGACTGGCAACAAGGCCTTTCTTAACCTTGTTCCCCTTCTTGTGGGAAACGTGGCGTTGATTTTCACCAAAGGTGACTTAAGGGAGGTTAGCGAGCAGATTGCCAAGTACAAGGCTGTCCAACCTATTCTTATGTGCCCCAAGTACATCTCATATGACTCATATCACAATTGTTCCTATATGCAATCAGGACAGGTACCTTTGGGCCTCACGTGTTGTAATCAGCAGTGTTCTCAGACTTCAGAGCCTTTTCTTGTAAGCTCAAAATTCATGCCTCACCAGCATTGTTTCTTGATGAGATCAAGACAGTTCTTGATGACGAGTGTATGGGCTCCTCTTCTCCTTTTGGCTGGTAACTTGTGA 564 0.4521 MAGKLSKTAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRGLHADSVVVMGKNSMMKRSIILDAQKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKAVQPILMCPKYISYDSYHNCSYMQSGQVPLGLTCCNQQCSQTSEPFLVSSKFMPHQHCFLMRSRQFLMTSVWAPLLLLAGNL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0448 187 Coils Coil 184 187 - -
Apr2g0448 187 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 186 - -
Apr2g0448 187 Gene3D - 4 123 IPR043141 -
Apr2g0448 187 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 1 186 - -
Apr2g0448 187 SUPERFAMILY Ribosomal protein L10-like 7 106 IPR043141 -
Apr2g0448 187 Pfam Ribosomal protein L10 6 104 IPR001790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0448 Apr-Chr2 5190941 5192448 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0448 7 109 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 67.961 6.13e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0448 K02941 - mnt:21409050 157.918