Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0443 ATGGGATCACCATTCAAGCCCATCTCATGCACCAGAAAAACCTCATATAGAATAGAAACCAATAACATATCATACAAGTTGTGCAGCCAACTTGATGAATATACAAGTCTTTGTTTTGGTTTGAATCCTAGGAGAGGTGCAAAGATCATTTTGAAGGATATAACATGTGAGGCAAGGCCAGGGGAGTTAACAGCTATTGCTGGTCCCAGTGGAGCTGGAAAAAGCACACTGCTTGAGATTCTTGCAGGGAGAATACCCCCATGTAAGGTGTCAGGGCAAGTGCTTGTCAATCATAGACCTATGGATGTGAACCGGTTTCGAAGATCATCCGGGTATGTCACACAGGAAGATGCTTTGTTTCCATCACTTACAGTTAGAGAGACACTCATGTATAGTGCTATGCTGAGGCTTCCTGGGGAAAGAAAAGTGGCTGCCATCAGAGTTGCAGAGTTGATGAAGGAGCTTGGGTTGGACCATATTGCAGATTCAAGAATTGGTGGTGGATCAGACCATGGCATATCAGGTGGGGAAAGGCGTAGAGTTTCCATTGGTGTTGACTTAGTTCATGACCCTGCAGTTATTATGATTGATGAGCCAACTTCAGGGTTGGATTCAGCATCAGCTCTTAATGTAGTCTCATTGCTTAGACTAATGGCATTTAATCAAGGTAAGACAATTATTTTAACTATCCACCAACCTGGTTTCCGAATCTTAGAGCTATTTGATGGCCTCATTTTGCTGTCTGATGGATTTGTCATGCATAATGGGTCATTGAATCTTCTTGAGGCTAGGCTCAATTTAGCTGGGCATCACATTCCTGACCATGTCAATGTCCTCGAATTTGCTCTTGATGTCATGGATAGCTTAGGTATACATACTTCGGAATCACGAAACAACCAATTTCTTCTTAAAGACAAAGAGAATCAAGATCATAAGATGAGGATGCTGTACTCCAAGATTGTCAAAGAAAAGGCACTTGTGTACTCAAATACTCCATTGGAGGAGATTTTAATCCTAGGACAAAGATTTTGCAGCAACATATTCAGAACCAAGCAACTCTTTGTCACCAGGGTCATACAGGCCTTAGTAGCTGGTTTTGTACTGGGAACCATATTTTTGAATGTTGGTAGCCAACAAAGTCAAGTGGCATTGCAAACAAGAAGTGGCTTCTTTGCTTTCAGCCTTACCTTTTTGTTATCATCAACAACAGAAGGCCTACCTATTTTCTTGGAGGAGAGAAGAACTTTCATGAGAGAGACCTCAAGAGGAGCTTATAGAGTTTCTTCCTATGTTCTAGCAAATACCCTTGTGTTTGTTCCTTTCCTTCTATTGGTTGGTCTCCTGTACACTACTCCAGTTTATTGGCTGGTAGGATTAAGGAAAAGTATTGATGGTTTCTTTTACTTCTCCTTAGTGGTTTGGTTGGTCTTACTCATGTCAAATTCTCTTGTGGCTTGTTTCAGCGCTCTAGTGCCAAATTTCATCTTGGGAACCTCAGTGATTGCAGGTTTAATGGGGTCTTTCTTTCTATTTTCAGGGTATTTCATATCAAAGGAAAAAATACCCTGTTACTGGATTTTTATGCACTATTTGAGCCTATTCAAGTACCCATTTGAGTGCCTTATGATAAATGAGTATGGGGGAGAGCAAGGGGAAAGAAGATGCATAGAAATTAGCAATGGAAAATGCATATTATATGGAGTTGAGTTCTTAAAACAACAGGGTCTGAAAGAGTCACAAAAATGGACCAATTTAGTTGTAATGTTGGGCTTCATAGTGGGGTACAGAGTGCTTAGCTTTTTTATTCTTTGGTTCAGATGTTACAGAACCAGAAAATAG 1839 0.4062 MGSPFKPISCTRKTSYRIETNNISYKLCSQLDEYTSLCFGLNPRRGAKIILKDITCEARPGELTAIAGPSGAGKSTLLEILAGRIPPCKVSGQVLVNHRPMDVNRFRRSSGYVTQEDALFPSLTVRETLMYSAMLRLPGERKVAAIRVAELMKELGLDHIADSRIGGGSDHGISGGERRRVSIGVDLVHDPAVIMIDEPTSGLDSASALNVVSLLRLMAFNQGKTIILTIHQPGFRILELFDGLILLSDGFVMHNGSLNLLEARLNLAGHHIPDHVNVLEFALDVMDSLGIHTSESRNNQFLLKDKENQDHKMRMLYSKIVKEKALVYSNTPLEEILILGQRFCSNIFRTKQLFVTRVIQALVAGFVLGTIFLNVGSQQSQVALQTRSGFFAFSLTFLLSSTTEGLPIFLEERRTFMRETSRGAYRVSSYVLANTLVFVPFLLLVGLLYTTPVYWLVGLRKSIDGFFYFSLVVWLVLLMSNSLVACFSALVPNFILGTSVIAGLMGSFFLFSGYFISKEKIPCYWIFMHYLSLFKYPFECLMINEYGGEQGERRCIEISNGKCILYGVEFLKQQGLKESQKWTNLVVMLGFIVGYRVLSFFILWFRCYRTRK* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0443 612 CDD ABCG_EPDR 43 256 - -
Apr2g0443 612 Pfam ABC transporter 51 201 IPR003439 GO:0005524
Apr2g0443 612 Pfam ABC-2 type transporter 335 546 IPR013525 GO:0016020|GO:0140359
Apr2g0443 612 Gene3D - 17 273 IPR027417 -
Apr2g0443 612 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 604 - -
Apr2g0443 612 SMART AAA_5 60 251 IPR003593 -
Apr2g0443 612 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524
Apr2g0443 612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 266 IPR027417 -
Apr2g0443 612 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 2 604 - -
Apr2g0443 612 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 274 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0443 Apr-Chr2 5156060 5157898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0443 30 261 Calmodulin-binding Proteins AT2G36910 28.862 6.70e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0443 K05681 - gmx:100776372 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0443 2 5156060 5157898 Apr2g0443 2 5156060 5157898 ECH